TM237_BOVIN
ID TM237_BOVIN Reviewed; 400 AA.
AC E1BN97; Q29RJ8;
DT 22-FEB-2012, integrated into UniProtKB/Swiss-Prot.
DT 22-FEB-2012, sequence version 2.
DT 03-AUG-2022, entry version 52.
DE RecName: Full=Transmembrane protein 237;
GN Name=TMEM237;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hereford;
RX PubMed=19390049; DOI=10.1126/science.1169588;
RG The bovine genome sequencing and analysis consortium;
RT "The genome sequence of taurine cattle: a window to ruminant biology and
RT evolution.";
RL Science 324:522-528(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC STRAIN=Hereford; TISSUE=Hypothalamus;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the transition zone in primary cilia. Required
CC for ciliogenesis (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Part of the tectonic-like complex (also named B9 complex).
CC Interacts with TMEM107. {ECO:0000250|UniProtKB:Q96Q45}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}. Cell projection, cilium {ECO:0000250}.
CC Note=Localizes at the proximal region of primary cilia were observed,
CC consistent with localization to the transition zone. Anchored to the
CC transition zone by RPGRIP1L (By similarity). {ECO:0000250}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=E1BN97-1; Sequence=Displayed;
CC Name=2;
CC IsoId=E1BN97-2; Sequence=VSP_042404, VSP_042405;
CC -!- SIMILARITY: Belongs to the TMEM237 family. {ECO:0000305}.
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DR EMBL; AAFC03033006; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAFC03033172; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC114141; AAI14142.1; -; mRNA.
DR RefSeq; NP_001039665.1; NM_001046200.2. [E1BN97-1]
DR AlphaFoldDB; E1BN97; -.
DR STRING; 9913.ENSBTAP00000023181; -.
DR PaxDb; E1BN97; -.
DR PRIDE; E1BN97; -.
DR GeneID; 515467; -.
DR KEGG; bta:515467; -.
DR CTD; 65062; -.
DR eggNOG; ENOG502QTW0; Eukaryota.
DR HOGENOM; CLU_061097_0_0_1; -.
DR InParanoid; E1BN97; -.
DR OrthoDB; 1428687at2759; -.
DR TreeFam; TF329703; -.
DR Proteomes; UP000009136; Unplaced.
DR GO; GO:0035869; C:ciliary transition zone; ISS:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0060271; P:cilium assembly; ISS:UniProtKB.
DR GO; GO:0030111; P:regulation of Wnt signaling pathway; ISS:UniProtKB.
DR InterPro; IPR029409; TMEM237.
DR PANTHER; PTHR28388; PTHR28388; 1.
DR Pfam; PF15383; TMEM237; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Cell projection; Cilium;
KW Cilium biogenesis/degradation; Membrane; Phosphoprotein;
KW Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..400
FT /note="Transmembrane protein 237"
FT /id="PRO_0000415829"
FT TRANSMEM 221..241
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 262..282
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 297..317
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 352..372
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..112
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..84
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 85..105
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 17
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q96Q45"
FT MOD_RES 43
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q96Q45"
FT VAR_SEQ 1
FT /note="M -> MTHCACARGSEAAGCELPAPGSRQPPESQALDAM (in isoform
FT 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_042404"
FT VAR_SEQ 17..20
FT /note="SAIQ -> R (in isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_042405"
SQ SEQUENCE 400 AA; 44562 MW; 4A5A37CA7BB5D608 CRC64;
MGKKQVRPPR ALPPVPSAIQ DDIPLSRPKK KKPRTKTPLA SASSEGLVQT AVHRPPEGSE
PPTKDSIEHQ EAPVQRRQKK TRLPLELETT LTQKKTASPS LLPNENGINV EPDEEPVIQK
PRRKTKKTQP AELHYANELG VEDEDIITDE QSSPEQQSVF TAPTGISQPV GKVFVEKSRR
FQAADRAELI KTTEKIDVSM DMKPSWTTRD VALSVHRAFR MIGVFSHGFL AGCAVWNIVV
IYVLAGDELS DLSNLLQQYK TLAYPFQSLL YLLLALSTVS AFDRIDFAKT SVAIRNFLAL
DPRALASFLY FTALVLSLSQ QMTSDRIHLY TPSSVNGSLW AEGIEEQVLQ PWIVVNLVVA
VLVGLSWLFL SYRPGMDLSE ELMFSSDVEE YPDKGIKVSS