TM237_CAEEL
ID TM237_CAEEL Reviewed; 399 AA.
AC Q20687;
DT 22-FEB-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 2.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Transmembrane protein 237 homolog;
DE AltName: Full=Joubert syndrome 14 protein homolog {ECO:0000312|WormBase:F53A9.4};
GN Name=jbts-14 {ECO:0000312|WormBase:F53A9.4};
GN Synonyms=tmem-237 {ECO:0000250|UniProtKB:Q96Q45};
GN ORFNames=F53A9.4 {ECO:0000312|WormBase:F53A9.4};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP FUNCTION, AND SUBCELLULAR LOCATION.
RX PubMed=22152675; DOI=10.1016/j.ajhg.2011.11.005;
RA Huang L., Szymanska K., Jensen V.L., Janecke A.R., Innes A.M., Davis E.E.,
RA Frosk P., Li C., Willer J.R., Chodirker B.N., Greenberg C.R., McLeod D.R.,
RA Bernier F.P., Chudley A.E., Muller T., Shboul M., Logan C.V., Loucks C.M.,
RA Beaulieu C.L., Bowie R.V., Bell S.M., Adkins J., Zuniga F.I., Ross K.D.,
RA Wang J., Ban M.R., Becker C., Nurnberg P., Douglas S., Craft C.M.,
RA Akimenko M.A., Hegele R.A., Ober C., Utermann G., Bolz H.J., Bulman D.E.,
RA Katsanis N., Blacque O.E., Doherty D., Parboosingh J.S., Leroux M.R.,
RA Johnson C.A., Boycott K.M.;
RT "TMEM237 is mutated in individuals with a Joubert syndrome related disorder
RT and expands the role of the TMEM family at the ciliary transition zone.";
RL Am. J. Hum. Genet. 89:713-730(2011).
CC -!- FUNCTION: Component of the transition zone in primary cilia. Required
CC for ciliogenesis. {ECO:0000269|PubMed:22152675}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}. Cell projection, cilium
CC {ECO:0000269|PubMed:22152675}. Note=Localizes the transition zone.
CC -!- SIMILARITY: Belongs to the TMEM237 family. {ECO:0000305}.
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DR EMBL; FO081048; CCD68803.1; -; Genomic_DNA.
DR PIR; T16433; T16433.
DR RefSeq; NP_509471.2; NM_077070.4.
DR AlphaFoldDB; Q20687; -.
DR STRING; 6239.F53A9.4; -.
DR TCDB; 8.A.121.1.5; the transmembrane protein 237 (tmem237) family.
DR EPD; Q20687; -.
DR PaxDb; Q20687; -.
DR EnsemblMetazoa; F53A9.4.1; F53A9.4.1; WBGene00018727.
DR GeneID; 181116; -.
DR KEGG; cel:CELE_F53A9.4; -.
DR UCSC; F53A9.4; c. elegans.
DR CTD; 181116; -.
DR WormBase; F53A9.4; CE30141; WBGene00018727; jbts-14.
DR eggNOG; ENOG502SDR2; Eukaryota.
DR HOGENOM; CLU_691244_0_0_1; -.
DR InParanoid; Q20687; -.
DR OMA; CIQLESQ; -.
DR OrthoDB; 1174719at2759; -.
DR PhylomeDB; Q20687; -.
DR PRO; PR:Q20687; -.
DR Proteomes; UP000001940; Chromosome X.
DR Bgee; WBGene00018727; Expressed in pharyngeal muscle cell (C elegans) and 3 other tissues.
DR GO; GO:0036064; C:ciliary basal body; IDA:UniProtKB.
DR GO; GO:0035869; C:ciliary transition zone; IDA:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0060271; P:cilium assembly; IMP:UniProtKB.
DR GO; GO:1905515; P:non-motile cilium assembly; IGI:WormBase.
DR InterPro; IPR029409; TMEM237.
DR PANTHER; PTHR28388; PTHR28388; 1.
DR Pfam; PF15383; TMEM237; 1.
PE 3: Inferred from homology;
KW Cell projection; Cilium; Cilium biogenesis/degradation; Membrane;
KW Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..399
FT /note="Transmembrane protein 237 homolog"
FT /id="PRO_0000415835"
FT TRANSMEM 222..242
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 256..276
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 301..321
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 343..363
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..158
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 51..67
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 68..86
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 110..135
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 144..158
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 399 AA; 45587 MW; F36E8D752C3BB9E8 CRC64;
MPPTSRPVPP PPKRRISESS SSSDDELTGN NSFRENQQRR FRENNEVGNI SDSDNDEVFS
HQESQSVGFI ETDEERQREE HAQNSNLRNR RVSYGKIPVP PMSMTVEDIQ EAAKHSREDP
SGETVEVRRP NDPRRSSVSL DVFKSFRDPH DKRNMPAKDK TIYVEGPNGK FREMKKGKFW
NRDKFDSPKK DAEKKQDEDS VIPFLLKAPG QAYRTQRVYN QIANIIQGFL AGISVMLAIF
SFNLEPEVLL TGYRYMSLPI HAGFMVAFTV GLVSAIDRTG IYEVEHFTSR TRLTATVYNN
GLITFIVWFV GLVSTLLCIQ LESQLAFAPT RIPSEDLVHH WRVFNVLRAL TSGLGFLLLA
FKPDSDTMAK ELREAIYEQL ELVTSDPERR RVIITAMKI