TM2D1_CAEEL
ID TM2D1_CAEEL Reviewed; 210 AA.
AC P61228;
DT 10-MAY-2004, integrated into UniProtKB/Swiss-Prot.
DT 10-MAY-2004, sequence version 1.
DT 03-AUG-2022, entry version 86.
DE RecName: Full=TM2 domain-containing protein C02F5.13;
DE Flags: Precursor;
GN ORFNames=C02F5.13;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=7906398; DOI=10.1038/368032a0;
RA Wilson R., Ainscough R., Anderson K., Baynes C., Berks M., Bonfield J.,
RA Burton J., Connell M., Copsey T., Cooper J., Coulson A., Craxton M.,
RA Dear S., Du Z., Durbin R., Favello A., Fraser A., Fulton L., Gardner A.,
RA Green P., Hawkins T., Hillier L., Jier M., Johnston L., Jones M.,
RA Kershaw J., Kirsten J., Laisster N., Latreille P., Lightning J., Lloyd C.,
RA Mortimore B., O'Callaghan M., Parsons J., Percy C., Rifken L., Roopra A.,
RA Saunders D., Shownkeen R., Sims M., Smaldon N., Smith A., Smith M.,
RA Sonnhammer E., Staden R., Sulston J., Thierry-Mieg J., Thomas K.,
RA Vaudin M., Vaughan K., Waterston R., Watson A., Weinstock L.,
RA Wilkinson-Sproat J., Wohldman P.;
RT "2.2 Mb of contiguous nucleotide sequence from chromosome III of C.
RT elegans.";
RL Nature 368:32-38(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [3]
RP GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-91, AND IDENTIFICATION BY MASS
RP SPECTROMETRY.
RC STRAIN=Bristol N2;
RX PubMed=17761667; DOI=10.1074/mcp.m600392-mcp200;
RA Kaji H., Kamiie J., Kawakami H., Kido K., Yamauchi Y., Shinkawa T.,
RA Taoka M., Takahashi N., Isobe T.;
RT "Proteomics reveals N-linked glycoprotein diversity in Caenorhabditis
RT elegans and suggests an atypical translocation mechanism for integral
RT membrane proteins.";
RL Mol. Cell. Proteomics 6:2100-2109(2007).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the TM2 family. {ECO:0000305}.
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DR EMBL; FO080288; CCD62638.1; -; Genomic_DNA.
DR RefSeq; NP_001021138.1; NM_001025967.1.
DR AlphaFoldDB; P61228; -.
DR STRING; 6239.C02F5.13; -.
DR iPTMnet; P61228; -.
DR EPD; P61228; -.
DR PaxDb; P61228; -.
DR PeptideAtlas; P61228; -.
DR EnsemblMetazoa; C02F5.13.1; C02F5.13.1; WBGene00015353.
DR GeneID; 3565859; -.
DR KEGG; cel:CELE_C02F5.13; -.
DR UCSC; C02F5.13; c. elegans.
DR CTD; 3565859; -.
DR WormBase; C02F5.13; CE36093; WBGene00015353; -.
DR eggNOG; KOG1486; Eukaryota.
DR eggNOG; KOG4272; Eukaryota.
DR GeneTree; ENSGT00730000111181; -.
DR HOGENOM; CLU_084872_3_1_1; -.
DR InParanoid; P61228; -.
DR OMA; FLECKEP; -.
DR OrthoDB; 1278556at2759; -.
DR PhylomeDB; P61228; -.
DR PRO; PR:P61228; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00015353; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR007829; TM2.
DR Pfam; PF05154; TM2; 1.
PE 1: Evidence at protein level;
KW Glycoprotein; Membrane; Reference proteome; Signal; Transmembrane;
KW Transmembrane helix.
FT SIGNAL 1..18
FT /evidence="ECO:0000255"
FT CHAIN 19..210
FT /note="TM2 domain-containing protein C02F5.13"
FT /id="PRO_0000065113"
FT TRANSMEM 139..159
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 179..199
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CARBOHYD 14
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 91
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000269|PubMed:17761667"
SQ SEQUENCE 210 AA; 23850 MW; D8A372DB491300B7 CRC64;
MRRLPWLIPF FLVNISNGNN EFRIEFEYPN NEKSEKCFDS SKENDLLDLF YVSTNPLGPV
VECRFLENSF ILCEDPVPLY GPGQTGQQPA NESFRNEGKC LKMGGYRAED VEFTNVKCRV
LPCIECHGPR TFTKSTPCII YNGHYFLTTL LYSIFLGVVA VDRFCLGYSA MAVGKLMTLG
GFGIWWIVDI FLLVLGVLGP ADDSSWEPYY