TM39B_BOVIN
ID TM39B_BOVIN Reviewed; 492 AA.
AC Q17QW2;
DT 06-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 25-JUL-2006, sequence version 1.
DT 03-AUG-2022, entry version 77.
DE RecName: Full=Transmembrane protein 39B;
GN Name=TMEM39B;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Hereford; TISSUE=Ascending colon;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the TMEM39 family. {ECO:0000305}.
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DR EMBL; BC118147; AAI18148.1; -; mRNA.
DR RefSeq; NP_001069126.1; NM_001075658.1.
DR AlphaFoldDB; Q17QW2; -.
DR STRING; 9913.ENSBTAP00000022547; -.
DR PaxDb; Q17QW2; -.
DR PRIDE; Q17QW2; -.
DR Ensembl; ENSBTAT00000022547; ENSBTAP00000022547; ENSBTAG00000016954.
DR GeneID; 514263; -.
DR KEGG; bta:514263; -.
DR CTD; 55116; -.
DR VEuPathDB; HostDB:ENSBTAG00000016954; -.
DR VGNC; VGNC:36083; TMEM39B.
DR eggNOG; KOG3828; Eukaryota.
DR GeneTree; ENSGT00390000018895; -.
DR HOGENOM; CLU_028992_2_0_1; -.
DR InParanoid; Q17QW2; -.
DR OMA; IEWHFVL; -.
DR OrthoDB; 1460710at2759; -.
DR TreeFam; TF321110; -.
DR Proteomes; UP000009136; Chromosome 1.
DR Bgee; ENSBTAG00000016954; Expressed in vas deferens and 105 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR InterPro; IPR019397; Uncharacterised_TMEM39.
DR PANTHER; PTHR12995; PTHR12995; 1.
DR Pfam; PF10271; Tmp39; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..492
FT /note="Transmembrane protein 39B"
FT /id="PRO_0000279231"
FT TRANSMEM 77..97
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 115..135
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 153..175
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 185..205
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 288..308
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 322..342
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 421..441
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 447..467
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 25..54
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 8
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 492 AA; 56183 MW; E56F35A2B4C0F30C CRC64;
MGGRRGPNRT SYCRNPLCEP GSSGGSGGGH TSSASVTSVR SRTRSSSGTG LSSPPLATQT
VVPLQHCKIP ELPVQASILF ELQLFFCQLI ALFVHYINIY KTVWWYPPSH PPSHTSLNFH
LIDFNLLMVT TIVLGRRFIG SIVKEASQRG KVTLFRSILL FLTRFTVLTA TGWSLCRSLI
HLFRTYSFLN LLFLCYPFGM YIPFLQLNCD LRKTNLFSHV ASMGPREAVS GLARSRDYLL
TLRETWKQHT KQLYGPDAMP THACCLSPSL IRSEVEFLKM DFNWRMKEVL VSAMLSAYYV
AFVPVWFVKN THYYDKRWSC ELFLLVSIST SVILMQHLLP ASYCDLLHKA AAHLGCWQKV
DPALCSNVLQ HPWTEECMWP QGVLVKHSKN VYKAVGHYNV AIPSDVSHFR FHFFFSKPLR
ILNILLLLEG AVIVYQLYSL MSSDKWHQTI SLALILFSNY YAFFKLLRDR LVLGKAYSYS
ANSQRDLDHR FS