TM39B_DANRE
ID TM39B_DANRE Reviewed; 491 AA.
AC Q7ZW11;
DT 06-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Transmembrane protein 39B;
GN Name=tmem39b; ORFNames=zgc:55419;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=AB;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the TMEM39 family. {ECO:0000305}.
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DR EMBL; BC045334; AAH45334.1; -; mRNA.
DR RefSeq; NP_956154.1; NM_199860.1.
DR AlphaFoldDB; Q7ZW11; -.
DR STRING; 7955.ENSDARP00000006893; -.
DR PaxDb; Q7ZW11; -.
DR Ensembl; ENSDART00000002095; ENSDARP00000006893; ENSDARG00000018956.
DR GeneID; 334110; -.
DR KEGG; dre:334110; -.
DR CTD; 55116; -.
DR ZFIN; ZDB-GENE-030131-6042; tmem39b.
DR eggNOG; KOG3828; Eukaryota.
DR GeneTree; ENSGT00390000018895; -.
DR HOGENOM; CLU_028992_0_0_1; -.
DR InParanoid; Q7ZW11; -.
DR OMA; IEWHFVL; -.
DR OrthoDB; 1460710at2759; -.
DR PhylomeDB; Q7ZW11; -.
DR TreeFam; TF321110; -.
DR PRO; PR:Q7ZW11; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 13.
DR Bgee; ENSDARG00000018956; Expressed in mature ovarian follicle and 25 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR InterPro; IPR019397; Uncharacterised_TMEM39.
DR PANTHER; PTHR12995; PTHR12995; 1.
DR Pfam; PF10271; Tmp39; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..491
FT /note="Transmembrane protein 39B"
FT /id="PRO_0000279235"
FT TRANSMEM 79..99
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 115..135
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 152..172
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 185..205
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 290..310
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 322..342
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 423..443
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 449..469
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..56
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..56
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 9
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 20
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 29
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 45
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 491 AA; 55776 MW; 341367B966576644 CRC64;
MAGGRRGANR TTYCRSPLSN DTGSVGNGNH STSSPVTGVR SRTRNGSGTG MSSPPLATQT
VVPLKHCKIP ELSMDKNVLF ELHLFACHLI ALFVHYVNIY KTVWWYPPSH PPSHTSLNFH
LIDYNMLVFT VIVLARRLIA AIVKEASQSG KLSFPHSVFL VTARFAVLTL AGWSLCRSLI
YLFKTYSVLS LLFLCYPFGM YIPFFRLSCD FRRAGSMSPL SGIGSKDVGA AALGRGGRDY
LSVLKETWKQ HTSQLYSAQP MPTHACCLSP DLIRKEVEYL KMDFNWRMKE VLVSSMLSAY
YVAFVPVWFV KSTQYVDKRW SCELFILVSV STSVILMRHL LPPRYCDLLH KAAAHLGCWQ
KVDPSLCSNV LQHIWTEEYM WPQGVLVKHS KNVYKAMGHY NVAVPSDVSH YRFYFFFNKP
LRILNILIIL EGAMIFYQLY SLMCSEKWHQ TISLALILFS NYYAFFKLLR DRIVLGKAYS
YSASASNQKV S