TM39B_RAT
ID TM39B_RAT Reviewed; 492 AA.
AC Q66H44;
DT 06-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Transmembrane protein 39B;
GN Name=Tmem39b;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Kidney;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the TMEM39 family. {ECO:0000305}.
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DR EMBL; BC082025; AAH82025.1; -; mRNA.
DR RefSeq; NP_001014214.1; NM_001014192.1.
DR AlphaFoldDB; Q66H44; -.
DR STRING; 10116.ENSRNOP00000032295; -.
DR GlyGen; Q66H44; 1 site.
DR PhosphoSitePlus; Q66H44; -.
DR PaxDb; Q66H44; -.
DR Ensembl; ENSRNOT00000032558; ENSRNOP00000032295; ENSRNOG00000023746.
DR GeneID; 362608; -.
DR KEGG; rno:362608; -.
DR CTD; 55116; -.
DR RGD; 1359450; Tmem39b.
DR eggNOG; KOG3828; Eukaryota.
DR GeneTree; ENSGT00390000018895; -.
DR InParanoid; Q66H44; -.
DR OrthoDB; 1460710at2759; -.
DR PhylomeDB; Q66H44; -.
DR PRO; PR:Q66H44; -.
DR Proteomes; UP000002494; Chromosome 5.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR InterPro; IPR019397; Uncharacterised_TMEM39.
DR PANTHER; PTHR12995; PTHR12995; 1.
DR Pfam; PF10271; Tmp39; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..492
FT /note="Transmembrane protein 39B"
FT /id="PRO_0000279234"
FT TRANSMEM 77..97
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 115..135
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 153..175
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 185..205
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 288..308
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 322..342
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 421..441
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 447..467
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..53
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 25..53
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 8
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 492 AA; 56375 MW; 8130CE7F0C0E3EDA CRC64;
MGGRRGPNRT SYYRNPLCEP GSSGASGGGH SSSASVSSVR SRSRTTSGTG LSSPPLAAQT
VVPLQHCKIP ELPVQASILF ELQLFFCQLI ALFVHYINIY KTVWWYPPSH PPSHTSLNFH
LIDFNLLMVT TIVLGRRFIG SIVKEASQRG KVSLFRSILL FLTRFTVLTA TGWSLCRSLI
HLFRTYSFLN LLFLCYPFGM YIPFLQLNYD LRKTNLFSHV ASMGPREAVS GLARSRDYFL
TLRETWKQHT RQLYGPEAMP THACCLSPSL IRNEVEFLKM DFNWRMKEVL VSSMLSAYYV
AFVPVWFVKN THYYDKRWSC ELFLLVSIST SVILMQHLLP ASYCDLLHKA AAHLGCWQKV
DPALCSNVLQ HPWTEECMWP QGVLVKHSKN VYKALGHYNV AIPSDVSHFR FHFFFSNPLR
ILNILLLLEG AVIVYQLYSL MSSEKWHQTI SLALILFSNY YAFFKLLRDR LVLGKAYSYS
ASPQRDLDHR FS