TM39B_XENLA
ID TM39B_XENLA Reviewed; 477 AA.
AC Q6NRI4;
DT 06-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 45.
DE RecName: Full=Transmembrane protein 39B;
GN Name=tmem39b;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Oocyte;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the TMEM39 family. {ECO:0000305}.
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DR EMBL; BC070766; AAH70766.1; -; mRNA.
DR RefSeq; NP_001084906.1; NM_001091437.1.
DR AlphaFoldDB; Q6NRI4; -.
DR DNASU; 431957; -.
DR GeneID; 431957; -.
DR KEGG; xla:431957; -.
DR CTD; 431957; -.
DR Xenbase; XB-GENE-5904855; tmem39b.S.
DR Proteomes; UP000186698; Chromosome 2S.
DR Bgee; 431957; Expressed in oocyte and 19 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR019397; Uncharacterised_TMEM39.
DR PANTHER; PTHR12995; PTHR12995; 1.
DR Pfam; PF10271; Tmp39; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..477
FT /note="Transmembrane protein 39B"
FT /id="PRO_0000279236"
FT TRANSMEM 76..96
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 114..134
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 158..182
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 187..207
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 281..301
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 414..434
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 440..460
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 24..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 39..54
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 9
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 477 AA; 54235 MW; 90CBC3B9BEB51ED6 CRC64;
MAGGRRGPNR TSYCRTPLCD PGSAGGAAHG GMPSVGGVRS RARSSSSTGL SSPPLAAQTV
VPLRHCKIPD LPADRHLLFE LQLFFCHLIA LFVHYINIYK TVWWYPPSHP PSHTSLNFHL
IDFNVLTLTT IVLARRLIGA IVREASQGGK SSMPQSLLLV ATRFAVLTGT GWSFCRSIIL
LFRTHSFFNL LFLCYPFGMY IPFLQLGWDF RRPGLSHMPN TRDLASMDRG SKDYLHVLQH
ILRHHMPSAE PLPTHACCLS PDLIRSEVHY LKLDFNWRVR EVLLSSMLSA YYVAFVPVWF
VKSTQYYDKC WSCELFLQVS LSTSVILTQH LLPAQYCDLL HKAAAHLGCW QKVDPALCSN
MLQHSWMEEC MWPQGVLVKH NKNVYKAVGH YNVAIPSDVS HFRFHFFFSN PLRVLNILTT
LEGVLIFYQL YSLLSSEKWH HTISLALILF GNYYAFFKLL RDRIVLGKAY SYTAVPD