TMM17_RAT
ID TMM17_RAT Reviewed; 198 AA.
AC Q5HZE5;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=Transmembrane protein 17;
GN Name=Tmem17;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Transmembrane component of the tectonic-like complex, a
CC complex localized at the transition zone of primary cilia and acting as
CC a barrier that prevents diffusion of transmembrane proteins between the
CC cilia and plasma membranes. Required for ciliogenesis and sonic
CC hedgehog/SHH signaling (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Part of the tectonic-like complex (also named B9 complex).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell projection, cilium membrane {ECO:0000250};
CC Multi-pass membrane protein {ECO:0000250}. Note=Localizes to the
CC transition zone of primary cilia. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TMEM17 family. {ECO:0000305}.
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DR EMBL; BC089059; AAH89059.1; -; mRNA.
DR RefSeq; NP_001010961.1; NM_001010961.1.
DR RefSeq; XP_017454809.1; XM_017599320.1.
DR RefSeq; XP_017454810.1; XM_017599321.1.
DR AlphaFoldDB; Q5HZE5; -.
DR STRING; 10116.ENSRNOP00000012224; -.
DR GlyGen; Q5HZE5; 1 site.
DR PaxDb; Q5HZE5; -.
DR Ensembl; ENSRNOT00000012224; ENSRNOP00000012224; ENSRNOG00000009220.
DR GeneID; 360985; -.
DR KEGG; rno:360985; -.
DR UCSC; RGD:1310566; rat.
DR CTD; 200728; -.
DR RGD; 1310566; Tmem17.
DR eggNOG; KOG4694; Eukaryota.
DR GeneTree; ENSGT00940000153899; -.
DR HOGENOM; CLU_092836_0_0_1; -.
DR InParanoid; Q5HZE5; -.
DR OMA; YFFPFWW; -.
DR OrthoDB; 1544916at2759; -.
DR PhylomeDB; Q5HZE5; -.
DR TreeFam; TF323824; -.
DR PRO; PR:Q5HZE5; -.
DR Proteomes; UP000002494; Chromosome 14.
DR Bgee; ENSRNOG00000009220; Expressed in skeletal muscle tissue and 20 other tissues.
DR Genevisible; Q5HZE5; RN.
DR GO; GO:0060170; C:ciliary membrane; ISS:UniProtKB.
DR GO; GO:0035869; C:ciliary transition zone; ISS:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; ISO:RGD.
DR GO; GO:0036038; C:MKS complex; ISS:UniProtKB.
DR GO; GO:0060271; P:cilium assembly; ISS:UniProtKB.
DR GO; GO:1905515; P:non-motile cilium assembly; ISO:RGD.
DR GO; GO:0007224; P:smoothened signaling pathway; ISS:UniProtKB.
DR InterPro; IPR019184; Uncharacterised_TM-17.
DR PANTHER; PTHR13531; PTHR13531; 1.
DR Pfam; PF09799; Transmemb_17; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Cell projection; Cilium; Cilium biogenesis/degradation;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..198
FT /note="Transmembrane protein 17"
FT /id="PRO_0000255262"
FT TRANSMEM 47..67
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 78..98
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 110..130
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 142..162
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CARBOHYD 13
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 198 AA; 22555 MW; 5640DFA8C44FA164 CRC64;
MELPDPVRQR LSNLSLTMFG DSSRTGPESS EAADNEMVSS LPLQMSLYFN SYFFPLWWVS
CIVMLHLKYS VLPDYYKFIV ITVVILITLI EAIRLYLGCM GNLQEKVPEL AGFWLLSLLL
QLPLLLFLLL NEGLKNLPLE KAIHSIFTVF LTFQVISAFL TLKKMVNQLA ARFHLQDFDQ
LSASSATGRR ARQSSEEL