TMM47_CANLF
ID TMM47_CANLF Reviewed; 181 AA.
AC Q9XSV3;
DT 13-SEP-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1999, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Transmembrane protein 47;
DE AltName: Full=Brain cell membrane protein 1;
DE AltName: Full=Transmembrane 4 superfamily member 10;
GN Name=TMEM47; Synonyms=BCMP1, TM4SF10;
OS Canis lupus familiaris (Dog) (Canis familiaris).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis.
OX NCBI_TaxID=9615;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RC TISSUE=Thyroid;
RX PubMed=11472633; DOI=10.1186/1471-2164-2-3;
RA Christophe-Hobertus C., Szpirer C., Guyon R., Christophe D.;
RT "Identification of the gene encoding brain cell membrane protein 1 (BCMP1),
RT a putative four-transmembrane protein distantly related to the peripheral
RT myelin protein 22 / epithelial membrane proteins and the claudins.";
RL BMC Genomics 2:3-3(2001).
RN [2]
RP FUNCTION, SUBCELLULAR LOCATION, AND INTERACTION WITH CTNNB1; CTNNA1; PRKCI
RP AND PARD6B.
RX PubMed=26990309; DOI=10.1002/dvdy.24404;
RA Dong Y., Simske J.S.;
RT "The vertebrate claudin/PMP22/EMP22/MP20 family protein TMEM47 regulates
RT epithelial cell junction maturation and morphogenesis.";
RL Dev. Dyn. 245:653-666(2016).
CC -!- FUNCTION: Regulates cell junction organization in epithelial cells. May
CC play a role in the transition from adherens junction to tight junction
CC assembly. May regulate F-actin polymerization required for tight
CC junctional localization dynamics and affect the junctional localization
CC of PARD6B (PubMed:26990309). During podocyte differentiation may
CC negatively regulate activity of FYN and subsequently the abundance of
CC nephrin (By similarity). {ECO:0000250|UniProtKB:Q9JJG6,
CC ECO:0000269|PubMed:26990309}.
CC -!- SUBUNIT: Interacts with CTNNB1, CTNNA1, PRKCI, PARD6B
CC (PubMed:26990309). Interacts with FYB1 (By similarity).
CC {ECO:0000250|UniProtKB:Q9JJG6, ECO:0000269|PubMed:26990309}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}. Cell junction, adherens junction
CC {ECO:0000269|PubMed:26990309}. Note=Colocalizes with FYB1 at cell-cell
CC contacts in podocytes. {ECO:0000250|UniProtKB:Q9JJG6}.
CC -!- TISSUE SPECIFICITY: Highly expressed in brain.
CC {ECO:0000269|PubMed:11472633}.
CC -!- SIMILARITY: Belongs to the TMEM47 family. {ECO:0000305}.
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DR EMBL; AJ243320; CAB45864.1; -; mRNA.
DR RefSeq; NP_001003045.1; NM_001003045.1.
DR AlphaFoldDB; Q9XSV3; -.
DR SMR; Q9XSV3; -.
DR STRING; 9615.ENSCAFP00000020352; -.
DR PaxDb; Q9XSV3; -.
DR Ensembl; ENSCAFT00030037933; ENSCAFP00030033094; ENSCAFG00030020668.
DR Ensembl; ENSCAFT00040027709; ENSCAFP00040024068; ENSCAFG00040015040.
DR Ensembl; ENSCAFT00845038489; ENSCAFP00845030132; ENSCAFG00845021814.
DR GeneID; 403572; -.
DR KEGG; cfa:403572; -.
DR CTD; 83604; -.
DR VEuPathDB; HostDB:ENSCAFG00845021814; -.
DR eggNOG; KOG4671; Eukaryota.
DR GeneTree; ENSGT00530000063484; -.
DR HOGENOM; CLU_120054_1_0_1; -.
DR InParanoid; Q9XSV3; -.
DR OMA; EWSCNST; -.
DR OrthoDB; 1307601at2759; -.
DR TreeFam; TF312855; -.
DR Proteomes; UP000002254; Chromosome X.
DR Bgee; ENSCAFG00000013807; Expressed in spinal cord and 45 other tissues.
DR GO; GO:0005912; C:adherens junction; IEA:UniProtKB-SubCell.
DR GO; GO:0005911; C:cell-cell junction; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:Ensembl.
DR GO; GO:0098609; P:cell-cell adhesion; IBA:GO_Central.
DR InterPro; IPR015664; P53_induced.
DR PANTHER; PTHR14399; PTHR14399; 1.
PE 1: Evidence at protein level;
KW Acetylation; Cell junction; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250|UniProtKB:Q9BQJ4"
FT CHAIN 2..181
FT /note="Transmembrane protein 47"
FT /id="PRO_0000072572"
FT TRANSMEM 21..41
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 83..103
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 115..135
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 152..172
FT /note="Helical"
FT /evidence="ECO:0000255"
FT MOD_RES 2
FT /note="N-acetylalanine"
FT /evidence="ECO:0000250|UniProtKB:Q9BQJ4"
SQ SEQUENCE 181 AA; 19998 MW; A73A03FD0C3B3FBB CRC64;
MASAGSGMEE VRVSVLTPLK LVGLVCIFLA LCLDLGAVLS PAWVTADHQY YLSLWESCRK
PASLDIWHCE STLSSDWQIA TLALLLGGAA IILIAFLVGL ISICVGSRRR FYRPVAVMLF
AAVVLQVCSL VLYPIKFIET VSLKIYHEFN WGYGLAWGAT IFSFGGAILY CLNPKNYEDY
Y