TMM79_BOVIN
ID TMM79_BOVIN Reviewed; 395 AA.
AC Q5E9U3; A4FV77;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 15-MAR-2005, sequence version 1.
DT 03-AUG-2022, entry version 77.
DE RecName: Full=Transmembrane protein 79;
DE AltName: Full=Mattrin;
GN Name=TMEM79;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=16305752; DOI=10.1186/1471-2164-6-166;
RA Harhay G.P., Sonstegard T.S., Keele J.W., Heaton M.P., Clawson M.L.,
RA Snelling W.M., Wiedmann R.T., Van Tassell C.P., Smith T.P.L.;
RT "Characterization of 954 bovine full-CDS cDNA sequences.";
RL BMC Genomics 6:166-166(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Hereford; TISSUE=Fetal skin;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Contributes to the epidermal integrity and skin barrier
CC function. Plays a role in the lamellar granule (LG) secretory system
CC and in the stratum corneum (SC) epithelial cell formation (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Lysosome {ECO:0000250}. Golgi apparatus, trans-
CC Golgi network {ECO:0000250}. Membrane {ECO:0000305}; Multi-pass
CC membrane protein {ECO:0000305}. Note=Colocalized with TGOLN2 in the
CC trans-Golgi network. Colocalized with LAMP1 in the lysosome (By
CC similarity). {ECO:0000250}.
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DR EMBL; BT020827; AAX08844.1; -; mRNA.
DR EMBL; BC123830; AAI23831.1; -; mRNA.
DR RefSeq; NP_001014920.1; NM_001014920.1.
DR AlphaFoldDB; Q5E9U3; -.
DR STRING; 9913.ENSBTAP00000012416; -.
DR PaxDb; Q5E9U3; -.
DR Ensembl; ENSBTAT00000012416; ENSBTAP00000012416; ENSBTAG00000009436.
DR GeneID; 513599; -.
DR KEGG; bta:513599; -.
DR CTD; 84283; -.
DR VEuPathDB; HostDB:ENSBTAG00000009436; -.
DR VGNC; VGNC:36112; TMEM79.
DR eggNOG; ENOG502QVUB; Eukaryota.
DR GeneTree; ENSGT00390000002390; -.
DR HOGENOM; CLU_062246_1_0_1; -.
DR InParanoid; Q5E9U3; -.
DR OMA; YYMFLVE; -.
DR OrthoDB; 963760at2759; -.
DR TreeFam; TF333310; -.
DR Proteomes; UP000009136; Chromosome 3.
DR Bgee; ENSBTAG00000009436; Expressed in digestive system secreted substance and 101 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005765; C:lysosomal membrane; ISS:UniProtKB.
DR GO; GO:0032588; C:trans-Golgi network membrane; ISS:UniProtKB.
DR GO; GO:0042802; F:identical protein binding; IEA:Ensembl.
DR GO; GO:0070268; P:cornification; IEA:Ensembl.
DR GO; GO:0042335; P:cuticle development; IEA:Ensembl.
DR GO; GO:0002070; P:epithelial cell maturation; ISS:UniProtKB.
DR GO; GO:0061436; P:establishment of skin barrier; ISS:UniProtKB.
DR GO; GO:0031069; P:hair follicle morphogenesis; IEA:Ensembl.
DR GO; GO:0045684; P:positive regulation of epidermis development; ISS:UniProtKB.
DR GO; GO:0045055; P:regulated exocytosis; ISS:UniProtKB.
PE 2: Evidence at transcript level;
KW Golgi apparatus; Lysosome; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..395
FT /note="Transmembrane protein 79"
FT /id="PRO_0000254117"
FT TOPO_DOM 1..204
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 205..225
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 226..244
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 245..265
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 266..290
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 291..311
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 312..313
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 314..334
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 335..343
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 344..364
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 365..395
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT REGION 1..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 45..64
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 82..101
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 395 AA; 43502 MW; 0216D118850A6B3A CRC64;
MTEPETLALL EVKGPETLEK SPPQALVPNG RKLEGEDEVE SLGAESSRVG SSAESPTARE
GTEDGLDSTV SEAATLPWGT GPQPSAPFPD PPGWRNIEPE PPESEPPTKL EELPEDEASL
LPEKAARAFV PIDLQCIERR PQEDLVVCCE ASEGEHRRTF LPPRATHPEP PECKWAEAVV
KPPGHSCGGC GGCGGREALR AVASVGAALI LFPCLLYGAY AFLPFDAPRL PTMSSRLIYT
LRCGVFATFP IVLGILVYGL SLLCFAALRP FGEPRREVEI HRQYVAQSVQ LFILYFFNLA
VLSTYLPQDA LKLLPLLTGL FAISRLIYWL TFAVGRSFRG FGYGLTFLPL LSMLLWNFYY
MFVVEPERML TASESRLDYP DHARSASDYR PRSRG