TNFC_NOTEU
ID TNFC_NOTEU Reviewed; 250 AA.
AC Q9XT47;
DT 06-JUN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1999, sequence version 1.
DT 25-MAY-2022, entry version 91.
DE RecName: Full=Lymphotoxin-beta;
DE Short=LT-beta;
DE AltName: Full=Tumor necrosis factor C;
DE Short=TNF-C;
DE AltName: Full=Tumor necrosis factor ligand superfamily member 3;
GN Name=LTB; Synonyms=TNFC, TNFSF3;
OS Notamacropus eugenii (Tammar wallaby) (Macropus eugenii).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Metatheria; Diprotodontia; Macropodidae; Notamacropus.
OX NCBI_TaxID=9315;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Mammary gland;
RX PubMed=10547148; DOI=10.1089/107999099313028;
RA Harrison G.A., Deane E.M.;
RT "cDNA sequence of the lymphotoxin beta chain from a marsupial, Macropus
RT eugenii (Tammar wallaby).";
RL J. Interferon Cytokine Res. 19:1099-1102(1999).
CC -!- FUNCTION: Cytokine that binds to LTBR/TNFRSF3. May play a specific role
CC in immune response regulation. Provides the membrane anchor for the
CC attachment of the heterotrimeric complex to the cell surface.
CC -!- SUBUNIT: Heterotrimer of either two LTB and one LTA subunits or (less
CC prevalent) two LTA and one LTB subunits. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass type II
CC membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the tumor necrosis factor family. {ECO:0000305}.
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DR EMBL; AF119337; AAD41774.1; -; mRNA.
DR AlphaFoldDB; Q9XT47; -.
DR SMR; Q9XT47; -.
DR HOGENOM; CLU_096531_0_0_1; -.
DR GO; GO:0005615; C:extracellular space; IEA:UniProtKB-KW.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005125; F:cytokine activity; IEA:UniProtKB-KW.
DR GO; GO:0005164; F:tumor necrosis factor receptor binding; IEA:InterPro.
DR GO; GO:0006955; P:immune response; IEA:InterPro.
DR CDD; cd00184; TNF; 1.
DR Gene3D; 2.60.120.40; -; 1.
DR InterPro; IPR006053; TNF.
DR InterPro; IPR002961; TNF_C.
DR InterPro; IPR021184; TNF_CS.
DR InterPro; IPR006052; TNF_dom.
DR InterPro; IPR008983; Tumour_necrosis_fac-like_dom.
DR PANTHER; PTHR11471:SF29; PTHR11471:SF29; 1.
DR Pfam; PF00229; TNF; 1.
DR PRINTS; PR01234; TNECROSISFCT.
DR PRINTS; PR01237; TNFC.
DR SMART; SM00207; TNF; 1.
DR SUPFAM; SSF49842; SSF49842; 1.
DR PROSITE; PS00251; TNF_1; 1.
DR PROSITE; PS50049; TNF_2; 1.
PE 2: Evidence at transcript level;
KW Cytokine; Glycoprotein; Membrane; Signal-anchor; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..250
FT /note="Lymphotoxin-beta"
FT /id="PRO_0000185487"
FT TOPO_DOM 1..26
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 27..47
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 48..250
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT CARBOHYD 228
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 250 AA; 26143 MW; AD37FB975452FE84 CRC64;
MGAPGLETRA GGPNGKSYLL LASVGAAVLG TLLLSVPITV LTVLALMPQE QGGQVADPSG
PGGQLLQQLG FHKLPVESRS DLSPIPPAAH LIGIAKSSHG LRWVSGYEEA FLKSGTQFLG
DEGLLALPQD GIYFLYCHIG YRGRAPSGGE QFRSQAGDPG VPVTLSSQLF RARGASGSGE
PELLLQGFET VTPPVQHARG VGQGPLWYAT VGFGGLVQLR GGEKIYVNVS HLELVDFRRG
KTFFGAVMVG