TOM20_ORYSI
ID TOM20_ORYSI Reviewed; 201 AA.
AC A2WYG9; A6N041; B8A8F6;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 25-MAY-2022, entry version 73.
DE RecName: Full=Probable mitochondrial import receptor subunit TOM20;
DE AltName: Full=Translocase of outer membrane 20 kDa subunit;
GN Name=TOM20; ORFNames=OsI_04972;
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 46-201, AND INDUCTION.
RC STRAIN=cv. IR64;
RX PubMed=18594887; DOI=10.1007/s10142-008-0088-5;
RA Kumari S., Panjabi Nee Sabharwal V., Kushwaha H.R., Sopory S.K.,
RA Singla-Pareek S.L., Pareek A.;
RT "Transcriptome map for seedling stage specific salinity stress response
RT indicates a specific set of genes as candidate for saline tolerance in
RT Oryza sativa L.";
RL Funct. Integr. Genomics 9:109-123(2009).
CC -!- FUNCTION: Central component of the receptor complex responsible for the
CC recognition and translocation of cytosolically synthesized
CC mitochondrial preproteins. Together with TOM22 functions as the transit
CC peptide receptor at the surface of the mitochondrion outer membrane and
CC facilitates the movement of preproteins into the translocation pore (By
CC similarity). {ECO:0000250}.
CC -!- SUBUNIT: Forms part of the preprotein translocase complex of the outer
CC mitochondrial membrane (TOM complex). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion outer membrane {ECO:0000305};
CC Single-pass membrane protein {ECO:0000305}.
CC -!- INDUCTION: By salt-stress. {ECO:0000269|PubMed:18594887}.
CC -!- MISCELLANEOUS: In mammals and fungi, the transmembrane domain is
CC located at the N-terminus while it is located at the C-terminus in
CC plants. The overall orientation of the protein in the membrane is
CC therefore inverted.
CC -!- SIMILARITY: Belongs to the Tom20 family. {ECO:0000305}.
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DR EMBL; CM000126; EEC72059.1; -; Genomic_DNA.
DR EMBL; EF576023; ABR25611.1; -; mRNA.
DR AlphaFoldDB; A2WYG9; -.
DR SMR; A2WYG9; -.
DR STRING; 39946.A2WYG9; -.
DR EnsemblPlants; BGIOSGA005073-TA; BGIOSGA005073-PA; BGIOSGA005073.
DR Gramene; BGIOSGA005073-TA; BGIOSGA005073-PA; BGIOSGA005073.
DR HOGENOM; CLU_117357_0_0_1; -.
DR OMA; FAKSHPP; -.
DR Proteomes; UP000007015; Chromosome 1.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005742; C:mitochondrial outer membrane translocase complex; IEA:InterPro.
DR GO; GO:0045040; P:protein insertion into mitochondrial outer membrane; IEA:InterPro.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR010547; TOM20_imprt_rcpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR32409; PTHR32409; 1.
DR SUPFAM; SSF48452; SSF48452; 1.
PE 2: Evidence at transcript level;
KW Membrane; Mitochondrion; Mitochondrion outer membrane; Protein transport;
KW Reference proteome; Repeat; TPR repeat; Transmembrane; Transmembrane helix;
KW Transport.
FT CHAIN 1..201
FT /note="Probable mitochondrial import receptor subunit
FT TOM20"
FT /id="PRO_0000356193"
FT TOPO_DOM 1..169
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 170..190
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 191..201
FT /note="Mitochondrial intermembrane"
FT /evidence="ECO:0000255"
FT REPEAT 43..76
FT /note="TPR 1"
FT REPEAT 88..121
FT /note="TPR 2"
SQ SEQUENCE 201 AA; 22475 MW; 7F8F46801225AA3B CRC64;
MDMGAMSDPE RMFFFDLACQ NAKVTYEQNP HDADNLTRWG GALLELSQMR NGPESLKCLE
DAESKLEEAL KIDPMKADAL WCLGNAQTSH GFFTSDTVKA NEFFEKATQC FQKAVDVEPA
NDLYRKSLDL SSKAPELHME IHRQMASQAS QAASSTSNTR QSRKKKDSDF WYDVFGWVVL
GVGMVVWVGL AKSNAPPQAP R