TORL3_ARATH
ID TORL3_ARATH Reviewed; 615 AA.
AC Q6NPR6; Q8VYW3; Q9FJI8;
DT 30-NOV-2016, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 25-MAY-2022, entry version 129.
DE RecName: Full=TORTIFOLIA1-like protein 3 {ECO:0000303|PubMed:15324671};
GN Name=TOR1L3 {ECO:0000303|PubMed:15324671};
GN OrderedLocusNames=At5g62580 {ECO:0000312|Araport:AT5G62580};
GN ORFNames=K19B1.19 {ECO:0000312|EMBL:BAB11508.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000312|EMBL:AAR23722.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=9872454; DOI=10.1093/dnares/5.5.297;
RA Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence
RT features of the regions of 1,013,767 bp covered by sixteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:297-308(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY.
RX PubMed=15324671; DOI=10.1016/j.cub.2004.08.033;
RA Buschmann H., Fabri C.O., Hauptmann M., Hutzler P., Laux T., Lloyd C.W.,
RA Schaeffner A.R.;
RT "Helical growth of the Arabidopsis mutant tortifolia1 reveals a plant-
RT specific microtubule-associated protein.";
RL Curr. Biol. 14:1515-1521(2004).
RN [5]
RP GENE FAMILY.
RX PubMed=15557095; DOI=10.1104/pp.104.051748;
RA Shoji T., Narita N.N., Hayashi K., Asada J., Hamada T., Sonobe S.,
RA Nakajima K., Hashimoto T.;
RT "Plant-specific microtubule-associated protein SPIRAL2 is required for
RT anisotropic growth in Arabidopsis.";
RL Plant Physiol. 136:3933-3944(2004).
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB11508.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB015469; BAB11508.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED97628.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70553.1; -; Genomic_DNA.
DR EMBL; AY069877; AAL47433.1; -; mRNA.
DR EMBL; BT010752; AAR23722.1; -; mRNA.
DR RefSeq; NP_001318866.1; NM_001345554.1.
DR RefSeq; NP_201064.2; NM_125653.4.
DR AlphaFoldDB; Q6NPR6; -.
DR SMR; Q6NPR6; -.
DR STRING; 3702.AT5G62580.1; -.
DR iPTMnet; Q6NPR6; -.
DR PaxDb; Q6NPR6; -.
DR PRIDE; Q6NPR6; -.
DR ProteomicsDB; 245204; -.
DR EnsemblPlants; AT5G62580.1; AT5G62580.1; AT5G62580.
DR EnsemblPlants; AT5G62580.2; AT5G62580.2; AT5G62580.
DR GeneID; 836379; -.
DR Gramene; AT5G62580.1; AT5G62580.1; AT5G62580.
DR Gramene; AT5G62580.2; AT5G62580.2; AT5G62580.
DR KEGG; ath:AT5G62580; -.
DR Araport; AT5G62580; -.
DR TAIR; locus:2154144; AT5G62580.
DR eggNOG; ENOG502QQTY; Eukaryota.
DR HOGENOM; CLU_025475_0_0_1; -.
DR InParanoid; Q6NPR6; -.
DR OMA; MHKFGGS; -.
DR OrthoDB; 698011at2759; -.
DR PhylomeDB; Q6NPR6; -.
DR PRO; PR:Q6NPR6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q6NPR6; baseline and differential.
DR GO; GO:0005874; C:microtubule; IEA:InterPro.
DR GO; GO:0008017; F:microtubule binding; IBA:GO_Central.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR033337; TORTIFOLIA1/SPIRAL2-like.
DR PANTHER; PTHR31355; PTHR31355; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 2: Evidence at transcript level;
KW Phosphoprotein; Reference proteome; Repeat.
FT CHAIN 1..615
FT /note="TORTIFOLIA1-like protein 3"
FT /id="PRO_0000438406"
FT REPEAT 44..81
FT /note="HEAT 1"
FT /evidence="ECO:0000255"
FT REPEAT 86..123
FT /note="HEAT 2"
FT /evidence="ECO:0000255"
FT REPEAT 125..163
FT /note="HEAT 3"
FT /evidence="ECO:0000255"
FT REPEAT 168..205
FT /note="HEAT 4"
FT /evidence="ECO:0000255"
FT REPEAT 213..250
FT /note="HEAT 5"
FT /evidence="ECO:0000255"
FT REGION 288..446
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 294..367
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 390..405
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 406..446
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 456
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q9XIE4"
FT CONFLICT 10
FT /note="M -> T (in Ref. 3; AAL47433)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 615 AA; 66617 MW; 9199E679BCE43B97 CRC64;
MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD
KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR DPDSSIRSTC VAAVSAISSR
TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL
VKCNAFKAKS AGVVVIGSVI GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA
LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS
LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN AKETSHSSHN TVQKLGGVSS
SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV
GSSQHGMRGL ETRVHGLELA LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK
HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
ETKPSKASET LKTTV
