TORL4_ARATH
ID TORL4_ARATH Reviewed; 625 AA.
AC Q93ZH1; Q9FZL2; Q9LFX1;
DT 30-NOV-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 25-MAY-2022, entry version 133.
DE RecName: Full=TORTIFOLIA1-like protein 4 {ECO:0000303|PubMed:15324671};
GN Name=TOR1L4 {ECO:0000303|PubMed:15324671};
GN OrderedLocusNames=At1g27210 {ECO:0000312|Araport:AT1G27210};
GN ORFNames=F17L21.1 {ECO:0000312|EMBL:AAF99750.1},
GN T7N9.27 {ECO:0000312|EMBL:AAF79870.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY.
RX PubMed=15324671; DOI=10.1016/j.cub.2004.08.033;
RA Buschmann H., Fabri C.O., Hauptmann M., Hutzler P., Laux T., Lloyd C.W.,
RA Schaeffner A.R.;
RT "Helical growth of the Arabidopsis mutant tortifolia1 reveals a plant-
RT specific microtubule-associated protein.";
RL Curr. Biol. 14:1515-1521(2004).
RN [5]
RP GENE FAMILY.
RX PubMed=15557095; DOI=10.1104/pp.104.051748;
RA Shoji T., Narita N.N., Hayashi K., Asada J., Hamada T., Sonobe S.,
RA Nakajima K., Hashimoto T.;
RT "Plant-specific microtubule-associated protein SPIRAL2 is required for
RT anisotropic growth in Arabidopsis.";
RL Plant Physiol. 136:3933-3944(2004).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF79870.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAF99750.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC000348; AAF79870.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC004557; AAF99750.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE30794.1; -; Genomic_DNA.
DR EMBL; AY057540; AAL09780.1; -; mRNA.
DR EMBL; AY140087; AAM98228.1; -; mRNA.
DR EMBL; BT008391; AAP37750.1; -; mRNA.
DR RefSeq; NP_564273.1; NM_102483.3.
DR AlphaFoldDB; Q93ZH1; -.
DR SMR; Q93ZH1; -.
DR IntAct; Q93ZH1; 1.
DR STRING; 3702.AT1G27210.1; -.
DR iPTMnet; Q93ZH1; -.
DR PaxDb; Q93ZH1; -.
DR PRIDE; Q93ZH1; -.
DR ProteomicsDB; 228294; -.
DR EnsemblPlants; AT1G27210.1; AT1G27210.1; AT1G27210.
DR GeneID; 839610; -.
DR Gramene; AT1G27210.1; AT1G27210.1; AT1G27210.
DR KEGG; ath:AT1G27210; -.
DR Araport; AT1G27210; -.
DR TAIR; locus:2205739; AT1G27210.
DR eggNOG; ENOG502QQTY; Eukaryota.
DR HOGENOM; CLU_025475_0_0_1; -.
DR InParanoid; Q93ZH1; -.
DR OMA; ETAGFCH; -.
DR OrthoDB; 698011at2759; -.
DR PhylomeDB; Q93ZH1; -.
DR PRO; PR:Q93ZH1; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q93ZH1; baseline and differential.
DR GO; GO:0005874; C:microtubule; IEA:InterPro.
DR GO; GO:0008017; F:microtubule binding; IBA:GO_Central.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000357; HEAT.
DR InterPro; IPR021133; HEAT_type_2.
DR InterPro; IPR033337; TORTIFOLIA1/SPIRAL2-like.
DR PANTHER; PTHR31355; PTHR31355; 1.
DR Pfam; PF02985; HEAT; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
DR PROSITE; PS50077; HEAT_REPEAT; 1.
PE 2: Evidence at transcript level;
KW Phosphoprotein; Reference proteome; Repeat.
FT CHAIN 1..625
FT /note="TORTIFOLIA1-like protein 4"
FT /id="PRO_0000438407"
FT REPEAT 69..106
FT /note="HEAT 1"
FT /evidence="ECO:0000255"
FT REPEAT 110..147
FT /note="HEAT 2"
FT /evidence="ECO:0000255"
FT REPEAT 149..186
FT /note="HEAT 3"
FT /evidence="ECO:0000255"
FT REPEAT 190..227
FT /note="HEAT 4"
FT /evidence="ECO:0000255"
FT REPEAT 230..268
FT /note="HEAT 5"
FT /evidence="ECO:0000255"
FT REGION 1..34
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 391..466
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 582..625
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..34
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 400..435
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 583..598
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 475
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q9XIE4"
SQ SEQUENCE 625 AA; 67542 MW; 387B03D99CF9262B CRC64;
MSVHGRFPAS PPISLSPSSS STSPSSQSPS TPPDLKQRVI ACLNKLADRD TLALASAELD
SIARNLTHDS FSPFLNCIHN TDSSVKSPVR KQCVALLSVL SRYHGDSLTP HLAKMVSTVI
RRLRDPDSSV RSACAVATAD MSAHVTRQPF ASVAKPLIET LIQEGDSNLQ IGAALCLAAS
VDAATDPESE QLRKSLPKIG KLLKSDGFKA KAALLSAVGS IITAGGAGTK PVLDWLVPVL
IEFLSSEDWA ARKSAAEALG KVATAEDLAS QYKKTCTTAL ESRRFDKVKS VRETMNRALN
LWKEVSTDDE ASLSPSRSST DDGNIGCFSS VTRSSTIDVG LKSARPKKVT PIMKRSPSLP
VNRSYAATRQ KENLPKRNQG NMTMLVEEAS SVDNKGPHFT PVKKSSEETE EKANSGGPDI
IKHTISEKSR EDSKVSSFGG LRSGSRVAPC SDDGDSVKNC KDDVEESKKD SEELSLIREQ
LALIENQQSS LLDLLQKFMG TSQSGIQSLE SRVSGLEMAL DEISCDLAVS NGRVPRNSSG
CAGDSCSKLP GTEFLSPKFW RKTEERPRNR NTANEMAAYD QGMRESTDTN NGQRGGSVFQ
KRSRRDQFQD CMHTTLQKPT TRLST
