TPC13_RAT
ID TPC13_RAT Reviewed; 418 AA.
AC Q5M887;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 26-FEB-2008, sequence version 2.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=Trafficking protein particle complex subunit 13;
GN Name=Trappc13;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Liver;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBUNIT: Part of the multisubunit TRAPP (transport protein particle)
CC complex. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TRAPPC13 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH88172.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; BC088172; AAH88172.1; ALT_INIT; mRNA.
DR RefSeq; NP_001013930.2; NM_001013908.2.
DR AlphaFoldDB; Q5M887; -.
DR STRING; 10116.ENSRNOP00000016439; -.
DR iPTMnet; Q5M887; -.
DR PhosphoSitePlus; Q5M887; -.
DR PaxDb; Q5M887; -.
DR PRIDE; Q5M887; -.
DR Ensembl; ENSRNOT00000110804; ENSRNOP00000077296; ENSRNOG00000012124.
DR GeneID; 294709; -.
DR KEGG; rno:294709; -.
DR UCSC; RGD:1306583; rat.
DR CTD; 80006; -.
DR RGD; 1306583; Trappc13.
DR eggNOG; KOG2625; Eukaryota.
DR GeneTree; ENSGT00390000015280; -.
DR HOGENOM; CLU_027041_0_0_1; -.
DR InParanoid; Q5M887; -.
DR OMA; FKFQVVK; -.
DR OrthoDB; 1608721at2759; -.
DR PhylomeDB; Q5M887; -.
DR TreeFam; TF314898; -.
DR Reactome; R-RNO-8876198; RAB GEFs exchange GTP for GDP on RABs.
DR PRO; PR:Q5M887; -.
DR Proteomes; UP000002494; Chromosome 2.
DR Bgee; ENSRNOG00000012124; Expressed in ovary and 20 other tissues.
DR Genevisible; Q5M887; RN.
DR GO; GO:1990072; C:TRAPPIII protein complex; IBA:GO_Central.
DR InterPro; IPR010378; TRAPPC13.
DR PANTHER; PTHR13134; PTHR13134; 1.
DR Pfam; PF06159; DUF974; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..418
FT /note="Trafficking protein particle complex subunit 13"
FT /id="PRO_0000321550"
SQ SEQUENCE 418 AA; 46520 MW; EF0B1FCB5709DD78 CRC64;
MEVNPPKQEH LLALKVMRLT KPTLFTNIPV TCEEKDLPGD LFNQLMKDDP STVNGAEILM
LGEMLTLPQN FGNIFLGETF SSYISVHNDS NQVVKDILVK ADLQTSSQRL NLSASNAAVA
ELKPDCCIDD VIHHEVKEIG THILVCAVSY TTQGGEKMYF RKFFKFQVLK PLDVKTKFYN
AESDLSSVTD EVFLEAQIQN ITTSPMFMEK VSLEPSIMYN VTELNSVNQA GECVSTFGSR
GYLQPMDTRQ YLYCLKPKKE FAEKAGIIKG VTVIGKLDIV WKTNLGERGR LQTSQLQRMA
PGYGDVRLSL EAIPDTVNLE EPFHITCKIT NCSSERTMDL VLEMCNTTSI HWCGISGRQL
GKLHPSSSLC LALTLLSSVQ GLQSVSGLRL TDTFLKRTYE YDDIAQVCVV SAAVEVEA