TPPC1_RAT
ID TPPC1_RAT Reviewed; 145 AA.
AC Q2KMM2;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 07-MAR-2006, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Trafficking protein particle complex subunit 1;
GN Name=Trappc1 {ECO:0000312|RGD:1311365};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=Brown Norway/Cub, SHR/OlaIpcv, SHRSP, Wistar Hd, and Wistar Kyoto;
RC TISSUE=Testis;
RA Liska F., Blachut S., Gosele C., Kren V., Krenova D., Hubner N.;
RT "Positional cloning of rat hd.";
RL Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May play a role in vesicular transport from endoplasmic
CC reticulum to Golgi. {ECO:0000250}.
CC -!- SUBUNIT: Part of the multisubunit transport protein particle (TRAPP)
CC complex. The heterodimer TRAPPC6B-TRAPPC3 interacts with TRAPPC1 likely
CC providing a core for TRAPP complex formation.
CC {ECO:0000250|UniProtKB:Q9Y5R8}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus, cis-Golgi network {ECO:0000250}.
CC Endoplasmic reticulum {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TRAPP small subunits family. BET5 subfamily.
CC {ECO:0000305}.
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DR EMBL; AY903234; AAX85364.1; -; mRNA.
DR EMBL; AY903235; AAX85365.1; -; mRNA.
DR EMBL; AY903236; AAX85366.1; -; mRNA.
DR EMBL; AY903237; AAX85367.1; -; mRNA.
DR EMBL; AY903238; AAX85368.1; -; mRNA.
DR RefSeq; NP_001034467.1; NM_001039378.1.
DR AlphaFoldDB; Q2KMM2; -.
DR SMR; Q2KMM2; -.
DR STRING; 10116.ENSRNOP00000053911; -.
DR PaxDb; Q2KMM2; -.
DR PRIDE; Q2KMM2; -.
DR Ensembl; ENSRNOT00000057079; ENSRNOP00000053911; ENSRNOG00000037627.
DR GeneID; 287427; -.
DR KEGG; rno:287427; -.
DR UCSC; RGD:1311365; rat.
DR CTD; 58485; -.
DR RGD; 1311365; Trappc1.
DR eggNOG; KOG3368; Eukaryota.
DR GeneTree; ENSGT00940000153761; -.
DR InParanoid; Q2KMM2; -.
DR OMA; HYFETPT; -.
DR OrthoDB; 1431711at2759; -.
DR PhylomeDB; Q2KMM2; -.
DR TreeFam; TF323681; -.
DR Reactome; R-RNO-204005; COPII-mediated vesicle transport.
DR Reactome; R-RNO-6798695; Neutrophil degranulation.
DR Reactome; R-RNO-8876198; RAB GEFs exchange GTP for GDP on RABs.
DR PRO; PR:Q2KMM2; -.
DR Proteomes; UP000002494; Chromosome 10.
DR Bgee; ENSRNOG00000037627; Expressed in cerebellum and 20 other tissues.
DR Genevisible; Q2KMM2; RN.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
DR GO; GO:0030008; C:TRAPP complex; ISO:RGD.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IBA:GO_Central.
DR InterPro; IPR011012; Longin-like_dom_sf.
DR InterPro; IPR007233; TRAPPC.
DR PANTHER; PTHR23249; PTHR23249; 1.
DR Pfam; PF04099; Sybindin; 1.
DR SMART; SM01399; Sybindin; 1.
DR SUPFAM; SSF64356; SSF64356; 1.
PE 2: Evidence at transcript level;
KW Endoplasmic reticulum; ER-Golgi transport; Golgi apparatus;
KW Reference proteome; Transport.
FT CHAIN 1..145
FT /note="Trafficking protein particle complex subunit 1"
FT /id="PRO_0000330742"
SQ SEQUENCE 145 AA; 16882 MW; 7C8C9FCC1118CDC7 CRC64;
MTVHNLYLFD RNGVCLHYSE WHRKKQAGIP KEEEYKLMYG MLFSIRSFVS KMSPLDMKDG
FLSFQTSRYK LHYYETPTGI KVVMNTDLGV GPIRDVLHHI YSALYVEFVV KNPLCPLGQT
VQSELFRSRL DSYVRSLPFF SARAG