TPS12_RICCO
ID TPS12_RICCO Reviewed; 587 AA.
AC B9T825;
DT 01-MAY-2013, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 1.
DT 03-AUG-2022, entry version 52.
DE RecName: Full=Probable terpene synthase 12;
DE Short=RcSeTPS12;
DE EC=4.2.3.-;
GN Name=TPS12; ORFNames=RCOM_0058130;
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale;
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
RN [2]
RP GENE NAME.
RX PubMed=22459969; DOI=10.1016/j.phytochem.2012.02.022;
RA Xie X., Kirby J., Keasling J.D.;
RT "Functional characterization of four sesquiterpene synthases from Ricinus
RT communis (castor bean).";
RL Phytochemistry 78:20-28(2012).
CC -!- FUNCTION: Probable sesquiterpene synthase. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Note=Binds 3 Mg(2+) ions per subunit. {ECO:0000250};
CC -!- DOMAIN: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for
CC the catalytic activity, presumably through binding to Mg(2+).
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: Does not produce any detectable product when tested in
CC vitro. {ECO:0000305|PubMed:22459969}.
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; EQ974896; EEF27987.1; -; Genomic_DNA.
DR RefSeq; XP_002534394.1; XM_002534348.1.
DR AlphaFoldDB; B9T825; -.
DR SMR; B9T825; -.
DR STRING; 3988.XP_002534394.1; -.
DR PRIDE; B9T825; -.
DR GeneID; 8260996; -.
DR KEGG; rcu:8260996; -.
DR eggNOG; ENOG502QUH3; Eukaryota.
DR InParanoid; B9T825; -.
DR OrthoDB; 401091at2759; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0010333; F:terpene synthase activity; IEA:InterPro.
DR GO; GO:0016102; P:diterpenoid biosynthetic process; IEA:InterPro.
DR GO; GO:0120251; P:hydrocarbon biosynthetic process; IEA:UniProt.
DR CDD; cd00684; Terpene_cyclase_plant_C1; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR Gene3D; 1.50.10.130; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR034741; Terpene_cyclase-like_1_C.
DR InterPro; IPR044814; Terpene_cyclase_plant_C1.
DR InterPro; IPR001906; Terpene_synth_N.
DR InterPro; IPR036965; Terpene_synth_N_sf.
DR InterPro; IPR005630; Terpene_synthase_metal-bd.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF01397; Terpene_synth; 1.
DR Pfam; PF03936; Terpene_synth_C; 1.
DR SFLD; SFLDG01019; Terpene_Cyclase_Like_1_C_Termi; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 3: Inferred from homology;
KW Lyase; Magnesium; Metal-binding; Reference proteome.
FT CHAIN 1..587
FT /note="Probable terpene synthase 12"
FT /id="PRO_0000422210"
FT MOTIF 338..342
FT /note="DDXXD motif"
FT BINDING 338
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 338
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 342
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 342
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 489
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
SQ SEQUENCE 587 AA; 67929 MW; 25C62D02BACAAB1A CRC64;
MAINLFKVSN FYTMRSYVSP HVPVPNVNLQ SVSCSAKAEL PHLRPVIKRR SANYPPTIWT
YNFVQSLNNH NADVLYKEKA RKLEEEVRRL INNESQEMLT TLELIDGIQR LGLAYLFEKD
IKGALDRFVS MGGCHVLPRK SLHAIALSFR LLRQHGYEVY QDDFKDFMDQ KGELLKCFKK
DVQGILSFYE ASFCNLEGED LLEKAKTETK VYLNDLQRNS KSDTVESISH ALELPLCRRM
VMLEARWYIE AYNKREDSNY TLLELAKLNF NMAQSILQRD LKDMSRWWNN LGLANKLSFS
RDRLMECFFW TIGMAFEPQF SSCRKGLTKV TSLITTIDDV YDVYGTLDEL EVFTDAVERW
DVNAVRDLPN CMQLSFLALY NTINEMAYET LKEQGEHIIP YLTKAWADLC KAFLQEARWS
HSKCIPSFDD YVENGWRSAS GNVILVHAYF LLGHNSKQAL DSLLNYHDIL RWPSVVFRLC
NDLATSSDEL NRGETANSIS CYMFENRVSE EQAREQINKL IDKAWTKMNE YHIGATHFGE
PFIEAAINVA RIPQCIYRHG DDHGAPDSRS KERVWSLIIE SISLVDS