TPS2_VALOF
ID TPS2_VALOF Reviewed; 562 AA.
AC J9R5V4;
DT 06-MAR-2013, integrated into UniProtKB/Swiss-Prot.
DT 28-NOV-2012, sequence version 1.
DT 03-AUG-2022, entry version 28.
DE RecName: Full=Valerena-4,7(11)-diene synthase;
DE EC=4.2.3.139;
DE AltName: Full=Terpene synthase 2;
DE Short=VoTPS2;
GN Name=TPS2;
OS Valeriana officinalis (Valerian) (Garden heliotrope).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Dipsacales; Caprifoliaceae; Valeriana.
OX NCBI_TaxID=19953;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, CATALYTIC ACTIVITY,
RP BIOPHYSICOCHEMICAL PROPERTIES, AND TISSUE SPECIFICITY.
RX PubMed=22776156; DOI=10.1111/j.1742-4658.2012.08692.x;
RA Pyle B.W., Tran H.T., Pickel B., Haslam T.M., Gao Z., MacNevin G.,
RA Vederas J.C., Kim S.U., Ro D.K.;
RT "Enzymatic synthesis of valerena-4,7(11)-diene by a unique sesquiterpene
RT synthase from the valerian plant (Valeriana officinalis).";
RL FEBS J. 279:3136-3146(2012).
CC -!- FUNCTION: Catalyzes formation of valerena-4,7(11)-diene, one of the
CC active ingredients responsible for the sedative effect extracted from
CC Valeriana officinalis root. {ECO:0000269|PubMed:22776156}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E,6E)-farnesyl diphosphate = diphosphate + valerena-4,7(11)-
CC diene; Xref=Rhea:RHEA:34467, ChEBI:CHEBI:33019, ChEBI:CHEBI:68625,
CC ChEBI:CHEBI:175763; EC=4.2.3.139;
CC Evidence={ECO:0000269|PubMed:22776156};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Note=Binds 3 Mg(2+) ions per subunit. {ECO:0000250};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=9.5 uM for farnesyl diphosphate {ECO:0000269|PubMed:22776156};
CC Note=kcat is 0.013 sec(-1) with farnesyl diphosphate as substrate.;
CC -!- TISSUE SPECIFICITY: Predominantly expressed in root.
CC {ECO:0000269|PubMed:22776156}.
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; JQ437840; AFR42418.1; -; mRNA.
DR AlphaFoldDB; J9R5V4; -.
DR SMR; J9R5V4; -.
DR KEGG; ag:AFR42418; -.
DR BioCyc; MetaCyc:MON-17911; -.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0010333; F:terpene synthase activity; IEA:InterPro.
DR GO; GO:0102412; F:valerena-4,7(11)-diene synthase activity; IEA:UniProtKB-EC.
DR GO; GO:0016102; P:diterpenoid biosynthetic process; IEA:InterPro.
DR CDD; cd00684; Terpene_cyclase_plant_C1; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR Gene3D; 1.50.10.130; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR034741; Terpene_cyclase-like_1_C.
DR InterPro; IPR044814; Terpene_cyclase_plant_C1.
DR InterPro; IPR001906; Terpene_synth_N.
DR InterPro; IPR036965; Terpene_synth_N_sf.
DR InterPro; IPR005630; Terpene_synthase_metal-bd.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF01397; Terpene_synth; 1.
DR Pfam; PF03936; Terpene_synth_C; 1.
DR SFLD; SFLDG01019; Terpene_Cyclase_Like_1_C_Termi; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 1: Evidence at protein level;
KW Lyase; Magnesium; Metal-binding.
FT CHAIN 1..562
FT /note="Valerena-4,7(11)-diene synthase"
FT /id="PRO_0000421726"
FT MOTIF 314..318
FT /note="DDXXD motif"
FT BINDING 314
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 314
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 318
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 318
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 467
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
SQ SEQUENCE 562 AA; 65880 MW; 746BE2119E4FD731 CRC64;
MESCLSFSSP PPTKKNIQEP VRPNAKFHKS VWGNHFLKYA SNPEQIDYDA DEQHEQLKEE
LRKKLVVNVT NERVEEQLKL IDAIQRLGVA YHFQREIDAV LNNLLLFRSN KDSDDIYMVS
LRFRLLRQQG HNVSCSVFEK FKNIDGRFKD SLRDDVRGLL SLYEATHMRV HKEDILEEAL
EFTIYELEQV VKLSSNDTLL ASEVIHALNM PIRKGLTRIE ARHFISVYQH DKSHDETLLK
FSKIDFNMLQ KLHQRELADL TIWWEKLNVA EKMPYARDRF VECYFWGLGV YFEPQYSRAR
KMFVKVINLT SLIDDTYDSY GTFDELDLFT DAVKRWNVNE TDKLPEYMRP LFMELLNVYN
AMEEELKEEG VSYRVEYAKQ SMIQIVTAYN DEAIWYHNGY VPTFDEYLKV ALISCGYMLL
STISFVGMGV TTVTKPAFDW VTNNPLILIA SCTINRLADD KVGHELEQER GHVASGVECY
MKHNNATKQE VVIEFNKRIS NAWKDINQEC LHPLPVPLHL VVRPLYLACF MNVFYKDEDW
YTHSNTQMKE CINSLLVESV PY