TPS3_PHYPO
ID TPS3_PHYPO Reviewed; 353 AA.
AC P9WEY5;
DT 07-APR-2021, integrated into UniProtKB/Swiss-Prot.
DT 07-APR-2021, sequence version 1.
DT 03-AUG-2022, entry version 5.
DE RecName: Full=Terpene synthase 3 {ECO:0000303|PubMed:31839833};
DE Short=TPS3 {ECO:0000303|PubMed:31839833};
DE EC=4.2.3.- {ECO:0000305|PubMed:31839833};
DE AltName: Full=Terpene cyclase TPS3 {ECO:0000305};
GN Name=TPS3 {ECO:0000303|PubMed:31839833};
OS Physarum polycephalum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Myxogastria;
OC Myxogastromycetidae; Physariida; Physaraceae; Physarum.
OX NCBI_TaxID=5791;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], DOMAIN, AND FUNCTION.
RX PubMed=31839833; DOI=10.3762/bjoc.15.281;
RA Chen X., Koellner T.G., Xiong W., Wei G., Chen F.;
RT "Emission and biosynthesis of volatile terpenoids from the plasmodial slime
RT mold Physarum polycephalum.";
RL Beilstein J. Org. Chem. 15:2872-2880(2019).
CC -!- FUNCTION: Terpene synthase that may be involved in the production of
CC volatile terpenoids (PubMed:31839833). Does not show detectable terpene
CC products with either farnesyl diphosphate (FPP) or geranyl diphosphate
CC (GPP) (PubMed:31839833). P.polycephalum has a unique biology and these
CC volatile terpenoids could function in internal communication of
CC P.polycephalum, to mark the territory that have been explored, or they
CC may be involved in chemotaxis (Probable). {ECO:0000269|PubMed:31839833,
CC ECO:0000305|PubMed:31839833}.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000250|UniProtKB:Q9UR08};
CC -!- DOMAIN: The 2 conserved active-site motifs D(D/E)XX(D/E) and NSE are
CC required for coordinating the divalent metal ions that stabilize the
CC PPi moiety of the substrate. {ECO:0000250|UniProtKB:Q9UR08}.
CC -!- DOMAIN: The C-terminal WxxxxxRY motif is frequently found in terpene
CC synthases and is important to guide product formation.
CC {ECO:0000305|PubMed:31839833}.
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; MN523654; QKE43663.1; -; mRNA.
DR AlphaFoldDB; P9WEY5; -.
DR SMR; P9WEY5; -.
DR GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.600.10; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 2: Evidence at transcript level;
KW Lyase; Magnesium; Metal-binding.
FT CHAIN 1..353
FT /note="Terpene synthase 3"
FT /id="PRO_0000452100"
FT MOTIF 118..122
FT /note="D(D/E)XX(D/E) motif"
FT /evidence="ECO:0000305|PubMed:31839833"
FT MOTIF 261..269
FT /note="NSE motif"
FT /evidence="ECO:0000305|PubMed:31839833"
FT MOTIF 342..349
FT /note="WxxxxxRY motif"
FT /evidence="ECO:0000305|PubMed:31839833"
FT BINDING 118
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q9UR08"
FT BINDING 118
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q9UR08"
FT BINDING 261
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250|UniProtKB:Q9UR08"
FT BINDING 269
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250|UniProtKB:Q9UR08"
FT SITE 115
FT /note="Plays a critical role in the stabilization of
FT intermediate cation"
FT /evidence="ECO:0000250|UniProtKB:B5HDJ6"
SQ SEQUENCE 353 AA; 40041 MW; 375EA8D6EF9F890B CRC64;
MEVLRQMLVH KANNSSMSTH KGLNRTEPVR MTYDHCELLG QLSTLNFSAA SNTFSSGYNT
TIKGSAPKTI QTVSSLFSKD ITKAMSDIGN LVARMFPTAS AERAAVILDI TVFGFIADDL
LEDAALSSDS EAFDKLHMLM LRLVRNDSFS EDEYPEYQNL IRFTRPIFTK FQALASRTLL
NRFAYTYQEY LQGVQWEASL QPNQIPDFET CKNVKRHVGA WLCYFVLAEF AREIEVPITV
RGNLEVQKFV TLACDIASYD NDTFLLKKEI RDGVVSNTIV ITYLHGAKRL QDALDRILEM
RKQTESEILA ITSNLPHFGK DDKVAREYIN ALTCVIGGNF EWCSKTTRYQ DPK