TPS4_RICCO
ID TPS4_RICCO Reviewed; 563 AA.
AC B9RHX7;
DT 01-MAY-2013, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 1.
DT 03-AUG-2022, entry version 49.
DE RecName: Full=Probable terpene synthase 4;
DE Short=RcSeTPS4;
DE EC=4.2.3.-;
GN Name=TPS4; ORFNames=RCOM_1574410;
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale;
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
RN [2]
RP GENE NAME.
RX PubMed=22459969; DOI=10.1016/j.phytochem.2012.02.022;
RA Xie X., Kirby J., Keasling J.D.;
RT "Functional characterization of four sesquiterpene synthases from Ricinus
RT communis (castor bean).";
RL Phytochemistry 78:20-28(2012).
CC -!- FUNCTION: Probable sesquiterpene synthase. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Note=Binds 3 Mg(2+) ions per subunit. {ECO:0000250};
CC -!- DOMAIN: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for
CC the catalytic activity, presumably through binding to Mg(2+).
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: Does not produce any detectable product when tested in
CC vitro. {ECO:0000305|PubMed:22459969}.
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; EQ973781; EEF48749.1; -; Genomic_DNA.
DR RefSeq; XP_002513346.1; XM_002513300.1.
DR AlphaFoldDB; B9RHX7; -.
DR SMR; B9RHX7; -.
DR STRING; 3988.XP_002513346.1; -.
DR PRIDE; B9RHX7; -.
DR GeneID; 8259987; -.
DR KEGG; rcu:8259987; -.
DR eggNOG; ENOG502QTGK; Eukaryota.
DR InParanoid; B9RHX7; -.
DR OrthoDB; 449049at2759; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0010333; F:terpene synthase activity; IEA:InterPro.
DR GO; GO:0016102; P:diterpenoid biosynthetic process; IEA:InterPro.
DR GO; GO:0120251; P:hydrocarbon biosynthetic process; IEA:UniProt.
DR CDD; cd00684; Terpene_cyclase_plant_C1; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR Gene3D; 1.50.10.130; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR034741; Terpene_cyclase-like_1_C.
DR InterPro; IPR044814; Terpene_cyclase_plant_C1.
DR InterPro; IPR001906; Terpene_synth_N.
DR InterPro; IPR036965; Terpene_synth_N_sf.
DR InterPro; IPR005630; Terpene_synthase_metal-bd.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF01397; Terpene_synth; 1.
DR Pfam; PF03936; Terpene_synth_C; 1.
DR SFLD; SFLDG01019; Terpene_Cyclase_Like_1_C_Termi; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 3: Inferred from homology;
KW Lyase; Magnesium; Metal-binding; Reference proteome.
FT CHAIN 1..563
FT /note="Probable terpene synthase 4"
FT /id="PRO_0000422202"
FT MOTIF 316..320
FT /note="DDXXD motif"
FT BINDING 316
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 316
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 320
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 320
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 469
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
SQ SEQUENCE 563 AA; 64489 MW; E55F1841EF5C675F CRC64;
MANAISNPAS FIGVHSPIAQ IRIPRLCVAK GMPTPIAQRD IILQDQIQLE NTCIRHAKAL
KEARLAFSKV RKDHSQNLIM IDALQRLGID YHFQEETQDV LEGQYNKIFA AHQQHHLSDA
ALRFRLLRQQ GYYVPASDVF SELKNREGKF KQELAADIKG LMELYEASQL SIQEENILDE
AGAFSAHFLN CWTPHLCDHQ TRIVSNTLKH PFHRTLARST IKNFLHFYNF QGENEYIQTF
TELAKLDFNM IQSIHRQEIN QVSNWWNNLG LASELKFARD QPEKWCMWPL VGVTDPSLSW
QRIELAKPVS LVYLIDDIFD LGGTPDQLTL FTEAVNRWEI TATEDLPYHM KICFRALYDV
TNQIAYKVYK KHQYNPIHSL KKAWARLCNA FLEEAKWFAA GKLPKADEYL NTAIVTSGVH
LVLVHTFFLM GDGITDQTIN LLNNDDPGII SSVATILRLW DDLGSAQDEN QDGYDGSYIE
CYMKDFPGTS VRDARNHVIS MISDTWKKLN QHCLSPNPFS GSFIRATLNG ARMVPLMYDF
DSNHNLPILQ QNIKSLLFES VAI