TPS6_RICCO
ID TPS6_RICCO Reviewed; 555 AA.
AC B9RI00;
DT 01-MAY-2013, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 1.
DT 03-AUG-2022, entry version 50.
DE RecName: Full=Probable terpene synthase 6;
DE Short=RcSeTPS6;
DE EC=4.2.3.-;
GN Name=TPS6; ORFNames=RCOM_1574750;
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale;
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
RN [2]
RP GENE NAME.
RX PubMed=22459969; DOI=10.1016/j.phytochem.2012.02.022;
RA Xie X., Kirby J., Keasling J.D.;
RT "Functional characterization of four sesquiterpene synthases from Ricinus
RT communis (castor bean).";
RL Phytochemistry 78:20-28(2012).
CC -!- FUNCTION: Probable sesquiterpene synthase. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Note=Binds 3 Mg(2+) ions per subunit. {ECO:0000250};
CC -!- DOMAIN: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for
CC the catalytic activity, presumably through binding to Mg(2+).
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: Does not produce any detectable product when tested in
CC vitro. {ECO:0000305|PubMed:22459969}.
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; EQ973781; EEF48772.1; -; Genomic_DNA.
DR AlphaFoldDB; B9RI00; -.
DR SMR; B9RI00; -.
DR STRING; 3988.XP_002513369.1; -.
DR PRIDE; B9RI00; -.
DR eggNOG; ENOG502SHPY; Eukaryota.
DR InParanoid; B9RI00; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0010333; F:terpene synthase activity; IEA:InterPro.
DR GO; GO:0016102; P:diterpenoid biosynthetic process; IEA:InterPro.
DR GO; GO:0120251; P:hydrocarbon biosynthetic process; IEA:UniProt.
DR CDD; cd00684; Terpene_cyclase_plant_C1; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR Gene3D; 1.50.10.130; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR034741; Terpene_cyclase-like_1_C.
DR InterPro; IPR044814; Terpene_cyclase_plant_C1.
DR InterPro; IPR001906; Terpene_synth_N.
DR InterPro; IPR036965; Terpene_synth_N_sf.
DR InterPro; IPR005630; Terpene_synthase_metal-bd.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF01397; Terpene_synth; 1.
DR Pfam; PF03936; Terpene_synth_C; 1.
DR SFLD; SFLDG01019; Terpene_Cyclase_Like_1_C_Termi; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 3: Inferred from homology;
KW Lyase; Magnesium; Metal-binding; Reference proteome.
FT CHAIN 1..555
FT /note="Probable terpene synthase 6"
FT /id="PRO_0000422204"
FT MOTIF 309..313
FT /note="DDXXD motif"
FT BINDING 309
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 309
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 313
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 313
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 460
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
SQ SEQUENCE 555 AA; 64359 MW; 5CDC9EDEF03FD55E CRC64;
MAEKDKYRPL ANFPSTAWGC SFASFSSSNS DFELYTREVE TLKEKVRPMV TASTKDPLEN
VQIINLLYRL GVSYHFENEI TDQLNHIFEI IPNHIISDDN DYDLYTVAIL FQILRQYGHK
VPCDVFNKFK NSDGKFKKSI ANDLKGLLSL YEASFLSVHG ENILDEAIAF TRPLLESFAD
QSSPHLAKYI RNSLLRPHHQ GIQRVEARQY ISFYEEDESR NETLLKFAKL DFNRLQLLHK
QELASLSRYK KYIAQIIIWE DLNLAKELPY IRDRLVETYL WAIGAHFEPQ YALSRAIIAK
YTTIVSAVDD TYDAYGTLDE LQRFTNAFQR CDIDAIDELP DYMKVLYRAL LNFFDQIEDE
VDEGRSYSTS VAKEAFKELV RSYYVEAQWF SDGYVPSFDE YMRNGLITST YTVLPAASFI
GMENTVGEKE YKWVQSNPKI VKAAKIICRL MDDITTHEDE QKRGHCASSI ECYMKEYGVS
EKKAIEEIQK ICANAWKDMN EECMKKPPTV SRTLLKYYVN LARVIDFVYK NLDSYTYASS
LKGDITTVFL ELLPV