TPSGB_SOLHA
ID TPSGB_SOLHA Reviewed; 544 AA.
AC Q9FQ27;
DT 21-SEP-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=(E,E)-germacrene B synthase;
DE EC=4.2.3.71;
GN Name=SSTLH1;
OS Solanum habrochaites (Wild tomato) (Lycopersicon hirsutum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=62890;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND CATALYTIC ACTIVITY.
RX PubMed=11090225; DOI=10.1105/tpc.12.11.2283;
RA van Der Hoeven R.S., Monforte A.J., Breeden D., Tanksley S.D.,
RA Steffens J.C.;
RT "Genetic Control and Evolution of Sesquiterpene Biosynthesis in
RT Lycopersicon esculentum and Lycopersicon hirsutum.";
RL Plant Cell 12:2283-2294(2000).
CC -!- FUNCTION: Involved in the biosynthesis of germacrene B.
CC {ECO:0000269|PubMed:11090225}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E,6E)-farnesyl diphosphate = (1E,4E)-germacrene B +
CC diphosphate; Xref=Rhea:RHEA:25444, ChEBI:CHEBI:5337,
CC ChEBI:CHEBI:33019, ChEBI:CHEBI:175763; EC=4.2.3.71;
CC Evidence={ECO:0000269|PubMed:11090225};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000305};
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000305};
CC Note=Binds 3 Mg(2+) or Mn(2+) ions per subunit. {ECO:0000305};
CC -!- PATHWAY: Secondary metabolite biosynthesis; terpenoid biosynthesis.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- DOMAIN: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for
CC the catalytic activity, presumably through binding to Mg(2+).
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; AF279455; AAG41891.1; -; mRNA.
DR AlphaFoldDB; Q9FQ27; -.
DR SMR; Q9FQ27; -.
DR KEGG; ag:AAG41891; -.
DR BRENDA; 4.2.3.71; 3102.
DR UniPathway; UPA00213; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0010333; F:terpene synthase activity; IEA:InterPro.
DR GO; GO:0016102; P:diterpenoid biosynthetic process; IEA:InterPro.
DR CDD; cd00684; Terpene_cyclase_plant_C1; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR Gene3D; 1.50.10.130; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR034741; Terpene_cyclase-like_1_C.
DR InterPro; IPR044814; Terpene_cyclase_plant_C1.
DR InterPro; IPR001906; Terpene_synth_N.
DR InterPro; IPR036965; Terpene_synth_N_sf.
DR InterPro; IPR005630; Terpene_synthase_metal-bd.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF01397; Terpene_synth; 1.
DR Pfam; PF03936; Terpene_synth_C; 1.
DR SFLD; SFLDG01019; Terpene_Cyclase_Like_1_C_Termi; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Lyase; Magnesium; Manganese; Metal-binding.
FT CHAIN 1..544
FT /note="(E,E)-germacrene B synthase"
FT /id="PRO_0000412240"
FT MOTIF 296..300
FT /note="DDXXD motif"
FT BINDING 296
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 296
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 300
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 300
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 449
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
SQ SEQUENCE 544 AA; 63723 MW; 16EA14FCDEA048BB CRC64;
MAASSANKSR PLANFHPTVW GYHFLSYTHE ITNQEKVEVD EYKETIRKML VEAPEGSEQK
LVLIDAMQRL GVAYHFHNEI ETSIQNIFDA PKQNNNLHIV SLRFRLVRQQ GHYMSSDVFK
QFTNQDGKFK ETLTNDVQGL LSLYEASYLR VRDEEILEEA LAFTTTHLKS IVSTMSNNNN
SLKVEVSEAL TQPIRMTLPR MEARRYISIY ENNDAHNHLL LKFAKLDFNM LQKLHQRELS
DLTRWWKDLD FANKYPYARD RLVECYFWIL GVYFEPKYSR ARKMMTKVLK MTSIIDDTFD
AYATFDELEP FNDAIQRWDA NAIDSIPPYM RPAYQAFLDI YSEMEQVLSK KGKLDRVYYA
KNEMKKLVRA YFKETQWLND CDHIPKYEEH MENSLVSGGY MMIPTTCLVG MEEFISIETF
EWLMNDPLIV RASSLIARAM NDIVGHEVEQ ERGHVASLIE CYMKDYGASK QEAYAKFKKD
VTNAWKDINK EFFRPTEVPM FVLERVLNLT RAAEPLYKEK DAYTNAKGKL KNMINSILIE
SVKI