TRAB_AGRFC
ID TRAB_AGRFC Reviewed; 421 AA.
AC Q44351;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Conjugal transfer protein TraB;
GN Name=traB; OrderedLocusNames=Atu6129; ORFNames=AGR_pTi_241;
OS Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens
OS (strain C58)).
OG Plasmid pTiC58.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC Agrobacterium tumefaciens complex.
OX NCBI_TaxID=176299;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8763953; DOI=10.1128/jb.178.14.4233-4247.1996;
RA Farrand S.K., Hwang I., Cook D.M.;
RT "The tra region of the nopaline-type Ti plasmid is a chimera with elements
RT related to the transfer systems of RSF1010, RP4, and F.";
RL J. Bacteriol. 178:4233-4247(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=11743193; DOI=10.1126/science.1066804;
RA Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K.,
RA Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y.,
RA Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P.,
RA Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R.,
RA Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G.,
RA Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y.,
RA Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S.,
RA Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F.,
RA Gordon M.P., Olson M.V., Nester E.W.;
RT "The genome of the natural genetic engineer Agrobacterium tumefaciens
RT C58.";
RL Science 294:2317-2323(2001).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C58 / ATCC 33970;
RX PubMed=11743194; DOI=10.1126/science.1066803;
RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B.,
RA Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K.,
RA Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M.,
RA Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C.,
RA Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
RT "Genome sequence of the plant pathogen and biotechnology agent
RT Agrobacterium tumefaciens C58.";
RL Science 294:2323-2328(2001).
CC -!- FUNCTION: Enhances conjugal transfer of the Ti plasmid.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAK91093.2; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AF010180; AAC17208.1; -; Genomic_DNA.
DR EMBL; AE007871; AAK91093.2; ALT_INIT; Genomic_DNA.
DR PIR; AG3243; AG3243.
DR PIR; T03421; T03421.
DR RefSeq; NP_396652.4; NC_003065.3.
DR AlphaFoldDB; Q44351; -.
DR EnsemblBacteria; AAK91093; AAK91093; Atu6129.
DR KEGG; atu:Atu6129; -.
DR PATRIC; fig|176299.10.peg.5336; -.
DR HOGENOM; CLU_042375_0_0_5; -.
DR OMA; GITGWAH; -.
DR Proteomes; UP000000813; Plasmid Ti.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0006807; P:nitrogen compound metabolic process; IEA:InterPro.
DR Gene3D; 3.60.110.10; -; 1.
DR InterPro; IPR003010; C-N_Hydrolase.
DR InterPro; IPR036526; C-N_Hydrolase_sf.
DR InterPro; IPR016707; Conjugal_tfr_TraB_rhizob.
DR Pfam; PF00795; CN_hydrolase; 1.
DR PIRSF; PIRSF017932; Conjugal_transfer_TraB_rhizob; 1.
DR SUPFAM; SSF56317; SSF56317; 1.
DR PROSITE; PS50263; CN_HYDROLASE; 1.
PE 4: Predicted;
KW Cell membrane; Conjugation; Membrane; Plasmid; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..421
FT /note="Conjugal transfer protein TraB"
FT /id="PRO_0000065596"
FT TRANSMEM 33..53
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 103..123
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 144..164
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 169..189
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 193..213
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 287..307
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 366..386
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 388..408
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 222..421
FT /note="CN hydrolase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00054"
SQ SEQUENCE 421 AA; 45195 MW; 3518583863B0AFCD CRC64;
MIHDTSARSR TAVFSAWRGR CSRLTRDRWR VALLILLSIA VGAVGWSGEA LLLPTAMLFP
LLWAQSPSRL VAGAVSAGYF LTASRGLPQG VANFYAADFW HGLLLWLAAS AGFVAVHAAF
WPARLQKRLP GRGALGWGKP VRYLAAAVLM GLPPFGITGW AHPLTAAGIL FPGFGWWGLG
ATTAGLAMMT SRYWPAAAIA LGGFWFWSAA TWTQPVLPDG WKGVDLEQGQ TLGRDGSLDH
HRDLIATVRA AAGAETRVIV LPESALGLWT PTVARLWQAG LRGADVTVIA GAAVIDPGGY
DNVMVTVSEG ETRILYRERM PIPVSMWQPW LQWTGQGGGA QAHFFANPAV DLAGTRIAPL
ICYEQLIVWP ILHSMLFSPA AIVATGNGWW TEGTSIVAIQ QAGVIAWAKL FGRPVVTAFN
T