TRAB_SINFN
ID TRAB_SINFN Reviewed; 387 AA.
AC P55416;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 1.
DT 03-AUG-2022, entry version 131.
DE RecName: Full=Probable conjugal transfer protein TraB;
GN Name=traB; OrderedLocusNames=NGR_a04000; ORFNames=y4dQ;
OS Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OG Plasmid sym pNGR234a.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=394;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234;
RX PubMed=9163424; DOI=10.1038/387394a0;
RA Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A.,
RA Perret X.;
RT "Molecular basis of symbiosis between Rhizobium and legumes.";
RL Nature 387:394-401(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234;
RX PubMed=19376903; DOI=10.1128/aem.00515-09;
RA Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT "Rhizobium sp. strain NGR234 possesses a remarkable number of secretion
RT systems.";
RL Appl. Environ. Microbiol. 75:4035-4045(2009).
CC -!- FUNCTION: Enhances conjugal transfer of the plasmid. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: To A.tumefaciens Ti plasmid TraB. {ECO:0000305}.
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DR EMBL; U00090; AAB91646.1; -; Genomic_DNA.
DR RefSeq; NP_443826.1; NC_000914.2.
DR RefSeq; WP_010875412.1; NC_000914.2.
DR AlphaFoldDB; P55416; -.
DR STRING; 394.NGR_a04000; -.
DR EnsemblBacteria; AAB91646; AAB91646; NGR_a04000.
DR KEGG; rhi:NGR_a04000; -.
DR PATRIC; fig|394.7.peg.421; -.
DR eggNOG; COG0388; Bacteria.
DR HOGENOM; CLU_042375_0_0_5; -.
DR OMA; GITGWAH; -.
DR OrthoDB; 1681982at2; -.
DR Proteomes; UP000001054; Plasmid sym pNGR234a.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0006807; P:nitrogen compound metabolic process; IEA:InterPro.
DR Gene3D; 3.60.110.10; -; 1.
DR InterPro; IPR003010; C-N_Hydrolase.
DR InterPro; IPR036526; C-N_Hydrolase_sf.
DR InterPro; IPR016707; Conjugal_tfr_TraB_rhizob.
DR Pfam; PF00795; CN_hydrolase; 1.
DR PIRSF; PIRSF017932; Conjugal_transfer_TraB_rhizob; 1.
DR SUPFAM; SSF56317; SSF56317; 1.
DR PROSITE; PS50263; CN_HYDROLASE; 1.
PE 4: Predicted;
KW Cell membrane; Conjugation; Membrane; Plasmid; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..387
FT /note="Probable conjugal transfer protein TraB"
FT /id="PRO_0000065597"
FT TRANSMEM 16..36
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 51..71
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 76..96
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 110..130
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 135..155
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 159..179
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 252..272
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 332..352
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 187..387
FT /note="CN hydrolase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00054"
SQ SEQUENCE 387 AA; 42199 MW; 0CBBF918150A2412 CRC64;
MRRDHLQPRL LTIASIVVGT VGWSGYALLL PVALAFPILW SRARTRRVAA LVSAGYFLAA
SRGLPQGVAA FYTSDLWPGL LLWLCASGSF VVVHTVLWTK RSDCRPFRYL LAAVLMAVPP
MGITGWAHPV TAAGILFPGW GWWGLVATTA GLMGLVTRMW PAVAIAFTGF WLWSAANWTE
SKLPASWQGV DLKLGSTLGR NTSIQRHRDL IATVKDRASG GVRNVVLPES ALGFWTPTFE
RLWVKALQGT EISVISGAAA IDATGYDNVL VTLSADGGRV LYRERMPVPG SMWQPWGSWL
GESDGARAHF FANPVVTVGN SRVAPLICYE QLVVWPTLQS MLYEPDLIVA VGNGWWTKGT
SIVAIQRVNA IAWAKLFAKP LVLSFNT