TRAM_SINFN
ID TRAM_SINFN Reviewed; 107 AA.
AC P55408;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 1.
DT 25-MAY-2022, entry version 107.
DE RecName: Full=Probable transcriptional repressor TraM;
GN Name=traM; OrderedLocusNames=NGR_a04080; ORFNames=y4dI;
OS Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OG Plasmid sym pNGR234a.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=394;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234;
RX PubMed=9163424; DOI=10.1038/387394a0;
RA Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A.,
RA Perret X.;
RT "Molecular basis of symbiosis between Rhizobium and legumes.";
RL Nature 387:394-401(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234;
RX PubMed=19376903; DOI=10.1128/aem.00515-09;
RA Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT "Rhizobium sp. strain NGR234 possesses a remarkable number of secretion
RT systems.";
RL Appl. Environ. Microbiol. 75:4035-4045(2009).
CC -!- FUNCTION: Acts to antagonize TraR-dependent activation. {ECO:0000305}.
CC -!- INTERACTION:
CC P55408; P55407: traR; NbExp=3; IntAct=EBI-9014222, EBI-9014218;
CC -!- SIMILARITY: To A.tumefaciens Ti plasmid TraM. {ECO:0000305}.
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DR EMBL; U00090; AAB91638.1; -; Genomic_DNA.
DR RefSeq; NP_443818.1; NC_000914.2.
DR RefSeq; WP_010875418.1; NC_000914.2.
DR PDB; 2Q0O; X-ray; 2.00 A; C/D=1-107.
DR PDBsum; 2Q0O; -.
DR AlphaFoldDB; P55408; -.
DR SMR; P55408; -.
DR DIP; DIP-46220N; -.
DR IntAct; P55408; 1.
DR STRING; 394.NGR_a04080; -.
DR DrugBank; DB08081; 3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE.
DR EnsemblBacteria; AAB91638; AAB91638; NGR_a04080.
DR KEGG; rhi:NGR_a04080; -.
DR PATRIC; fig|394.7.peg.429; -.
DR eggNOG; ENOG502ZPB6; Bacteria.
DR HOGENOM; CLU_2247894_0_0_5; -.
DR OMA; EARYSVM; -.
DR OrthoDB; 1955451at2; -.
DR EvolutionaryTrace; P55408; -.
DR Proteomes; UP000001054; Plasmid sym pNGR234a.
DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR015309; Tscrpt_rep_TraM.
DR InterPro; IPR036336; Tscrpt_rep_TraM_sf.
DR Pfam; PF09228; Prok-TraM; 1.
DR SUPFAM; SSF109631; SSF109631; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Plasmid; Reference proteome; Repressor; Transcription;
KW Transcription regulation.
FT CHAIN 1..107
FT /note="Probable transcriptional repressor TraM"
FT /id="PRO_0000065608"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT TURN 19..22
FT /evidence="ECO:0007829|PDB:2Q0O"
FT HELIX 25..56
FT /evidence="ECO:0007829|PDB:2Q0O"
FT HELIX 64..95
FT /evidence="ECO:0007829|PDB:2Q0O"
SQ SEQUENCE 107 AA; 12203 MW; B206500CE638ECAB CRC64;
MNDMGSSEVN DENKEKEARY SVMTKSELEA LAVSAIREHR RLLWADQAVY EEWLRASDDP
SISGPVLQTL QDEYVARQKR SEAQQEELSD ILDALGFVPD VPFDDDN