TRAR_ECOLI
ID TRAR_ECOLI Reviewed; 73 AA.
AC P41065;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 1.
DT 25-MAY-2022, entry version 110.
DE RecName: Full=Protein TraR;
GN Name=traR; OrderedLocusNames=ECOK12F083;
OS Escherichia coli (strain K12).
OG Plasmid F.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8021201; DOI=10.1128/jb.176.13.4182-4186.1994;
RA Doran T.J., Loh S.M., Firth N., Skurray R.A.;
RT "Molecular analysis of the F plasmid traVR region: traV encodes a
RT lipoprotein.";
RL J. Bacteriol. 176:4182-4186(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=7915817; DOI=10.1128/mr.58.2.162-210.1994;
RA Frost L.S., Ippen-Ihler K., Skurray R.A.;
RT "Analysis of the sequence and gene products of the transfer region of the F
RT sex factor.";
RL Microbiol. Rev. 58:162-210(1994).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / CR63;
RA Shimizu H., Saitoh Y., Suda Y., Uehara K., Sampei G., Mizobuchi K.;
RT "Complete nucleotide sequence of the F plasmid: its implications for
RT organization and diversification of plasmid genomes.";
RL Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 39-73.
RX PubMed=2265751; DOI=10.1016/0378-1119(90)90354-t;
RA Schandel K.A., Maneewannakul S., Vonder Haar R.A., Ippen-Ihler K.,
RA Webster R.E.;
RT "Nucleotide sequence of the F plasmid gene, traC, and identification of its
RT product.";
RL Gene 96:137-140(1990).
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DR EMBL; U01159; AAC44195.1; -; Genomic_DNA.
DR EMBL; M30936; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP001918; BAA97953.1; -; Genomic_DNA.
DR PIR; PQ0135; PQ0135.
DR RefSeq; NP_061462.1; NC_002483.1.
DR RefSeq; NP_862928.1; NC_004998.1.
DR RefSeq; WP_001278689.1; NZ_SSUW01000046.1.
DR RefSeq; YP_001965439.1; NC_010862.1.
DR RefSeq; YP_003829015.1; NC_014382.1.
DR RefSeq; YP_003937627.1; NC_014615.1.
DR RefSeq; YP_008997949.1; NC_023315.1.
DR RefSeq; YP_009060148.1; NC_024956.1.
DR RefSeq; YP_009068342.1; NC_025139.1.
DR RefSeq; YP_009070607.1; NC_025175.1.
DR RefSeq; YP_009070976.1; NC_025177.1.
DR RefSeq; YP_009071239.1; NC_025179.1.
DR PDB; 5W1S; X-ray; 3.81 A; M/N=1-73.
DR PDB; 6N57; EM; 3.70 A; M=2-73.
DR PDB; 6N58; EM; 3.78 A; M=2-73.
DR PDB; 6PSQ; EM; 3.40 A; N=2-73.
DR PDB; 6PSR; EM; 3.40 A; N=2-73.
DR PDB; 6PSS; EM; 3.50 A; N=2-73.
DR PDB; 6PST; EM; 3.00 A; N=2-73.
DR PDB; 6PSU; EM; 3.90 A; N=2-73.
DR PDB; 6PSV; EM; 3.50 A; N=2-73.
DR PDB; 6PSW; EM; 3.70 A; N=2-73.
DR PDBsum; 5W1S; -.
DR PDBsum; 6N57; -.
DR PDBsum; 6N58; -.
DR PDBsum; 6PSQ; -.
DR PDBsum; 6PSR; -.
DR PDBsum; 6PSS; -.
DR PDBsum; 6PST; -.
DR PDBsum; 6PSU; -.
DR PDBsum; 6PSV; -.
DR PDBsum; 6PSW; -.
DR AlphaFoldDB; P41065; -.
DR SMR; P41065; -.
DR PRIDE; P41065; -.
DR PATRIC; fig|83333.107.peg.630; -.
DR PhylomeDB; P41065; -.
DR PRO; PR:P41065; -.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR020460; Znf_C4-type_bac.
DR InterPro; IPR012783; Znf_C4_TraR.
DR InterPro; IPR000962; Znf_DskA_TraR.
DR InterPro; IPR020458; Znf_DskA_TraR_CS.
DR Pfam; PF01258; zf-dskA_traR; 1.
DR PRINTS; PR00618; DKSAZNFINGER.
DR TIGRFAMs; TIGR02419; C4_traR_proteo; 1.
DR PROSITE; PS01102; ZF_DKSA_1; 1.
DR PROSITE; PS51128; ZF_DKSA_2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Metal-binding; Plasmid; Zinc; Zinc-finger.
FT CHAIN 1..73
FT /note="Protein TraR"
FT /id="PRO_0000187547"
FT ZN_FING 37..61
FT /note="dksA C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00510"
FT TURN 3..5
FT /evidence="ECO:0007829|PDB:6PST"
FT HELIX 6..25
FT /evidence="ECO:0007829|PDB:6PST"
FT TURN 38..40
FT /evidence="ECO:0007829|PDB:6PST"
FT HELIX 46..51
FT /evidence="ECO:0007829|PDB:6PST"
FT HELIX 59..71
FT /evidence="ECO:0007829|PDB:6PST"
SQ SEQUENCE 73 AA; 8313 MW; D1785DE9B6714B2C CRC64;
MSDEADEAYS VTEQLTMTGI NRIRQKINAH GIPVYLCEAC GNPIPEARRK IFPGVTLCVE
CQAYQERQRK HYA