TRHO_LEPIN
ID TRHO_LEPIN Reviewed; 367 AA.
AC Q8CXS1;
DT 11-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 89.
DE RecName: Full=tRNA uridine(34) hydroxylase {ECO:0000255|HAMAP-Rule:MF_00469};
DE EC=1.14.-.- {ECO:0000255|HAMAP-Rule:MF_00469};
DE AltName: Full=tRNA hydroxylation protein O {ECO:0000255|HAMAP-Rule:MF_00469};
GN Name=trhO {ECO:0000255|HAMAP-Rule:MF_00469}; OrderedLocusNames=LA_3128;
OS Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain
OS 56601).
OC Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.
OX NCBI_TaxID=189518;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=56601;
RX PubMed=12712204; DOI=10.1038/nature01597;
RA Ren S.-X., Fu G., Jiang X.-G., Zeng R., Miao Y.-G., Xu H., Zhang Y.-X.,
RA Xiong H., Lu G., Lu L.-F., Jiang H.-Q., Jia J., Tu Y.-F., Jiang J.-X.,
RA Gu W.-Y., Zhang Y.-Q., Cai Z., Sheng H.-H., Yin H.-F., Zhang Y., Zhu G.-F.,
RA Wan M., Huang H.-L., Qian Z., Wang S.-Y., Ma W., Yao Z.-J., Shen Y.,
RA Qiang B.-Q., Xia Q.-C., Guo X.-K., Danchin A., Saint Girons I.,
RA Somerville R.L., Wen Y.-M., Shi M.-H., Chen Z., Xu J.-G., Zhao G.-P.;
RT "Unique physiological and pathogenic features of Leptospira interrogans
RT revealed by whole-genome sequencing.";
RL Nature 422:888-893(2003).
CC -!- FUNCTION: Catalyzes oxygen-dependent 5-hydroxyuridine (ho5U)
CC modification at position 34 in tRNAs. {ECO:0000255|HAMAP-
CC Rule:MF_00469}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=AH2 + O2 + uridine(34) in tRNA = 5-hydroxyuridine(34) in tRNA
CC + A + H2O; Xref=Rhea:RHEA:64224, Rhea:RHEA-COMP:11727, Rhea:RHEA-
CC COMP:13381, ChEBI:CHEBI:13193, ChEBI:CHEBI:15377, ChEBI:CHEBI:15379,
CC ChEBI:CHEBI:17499, ChEBI:CHEBI:65315, ChEBI:CHEBI:136877;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00469};
CC -!- SIMILARITY: Belongs to the TrhO family. {ECO:0000255|HAMAP-
CC Rule:MF_00469}.
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DR EMBL; AE010300; AAN50326.1; -; Genomic_DNA.
DR RefSeq; NP_713308.1; NC_004342.2.
DR RefSeq; WP_000013216.1; NC_004342.2.
DR AlphaFoldDB; Q8CXS1; -.
DR SMR; Q8CXS1; -.
DR STRING; 189518.LA_3128; -.
DR EnsemblBacteria; AAN50326; AAN50326; LA_3128.
DR GeneID; 61144301; -.
DR KEGG; lil:LA_3128; -.
DR PATRIC; fig|189518.3.peg.3106; -.
DR HOGENOM; CLU_038878_1_1_12; -.
DR InParanoid; Q8CXS1; -.
DR OMA; CDTHTNC; -.
DR Proteomes; UP000001408; Chromosome I.
DR GO; GO:0016705; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; IEA:UniProtKB-UniRule.
DR GO; GO:0006400; P:tRNA modification; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.250.10; -; 1.
DR HAMAP; MF_00469; TrhO; 1.
DR InterPro; IPR001763; Rhodanese-like_dom.
DR InterPro; IPR036873; Rhodanese-like_dom_sf.
DR InterPro; IPR022111; Rhodanese_C.
DR InterPro; IPR020936; TrhO.
DR InterPro; IPR040503; TRHO_N.
DR Pfam; PF00581; Rhodanese; 1.
DR Pfam; PF12368; Rhodanese_C; 1.
DR Pfam; PF17773; UPF0176_N; 1.
DR SMART; SM00450; RHOD; 1.
DR SUPFAM; SSF52821; SSF52821; 1.
DR PROSITE; PS50206; RHODANESE_3; 1.
PE 3: Inferred from homology;
KW Oxidoreductase; Reference proteome; tRNA processing.
FT CHAIN 1..367
FT /note="tRNA uridine(34) hydroxylase"
FT /id="PRO_0000161482"
FT DOMAIN 159..253
FT /note="Rhodanese"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00469"
FT ACT_SITE 213
FT /note="Cysteine persulfide intermediate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00469"
SQ SEQUENCE 367 AA; 42467 MW; C1C1AA59DDF69785 CRC64;
MANQGDFPKR TETKKRPLHN IYGKEILRKR LEEENFSRTT LSFYRYVILE NVQELRDQLY
AEWEILGVLG RIYIAREGIN AQLSIPSHNL DFFRKNLDSR NQFKDMQFKI AVEDDSKSFL
KLDLKIKKKI VADGLNDDAF DVTNVGKHLS AEEFNLHMED ENSIVVDVRN HYESEIGHFE
NAILPQSDTF REELRILLEL LNGKENHKIL MYCTGGIRCE KASAWLKHHG YKDVNQLHGG
IISYAHEVSQ KGLESKFKGK NFVFDGRLQE AIGNEVISSC HQCGAKCDRH VNCENPGCHV
LFIQCPSCSE KFEGCCTLEC QNVLHLPKEK QKEIRKGKLN ENRFFSKSKI RPKISELYHG
ILFKSSK