TRI44_RAT
ID TRI44_RAT Reviewed; 344 AA.
AC Q6QA27;
DT 07-DEC-2004, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=Tripartite motif-containing protein 44;
DE AltName: Full=Protein DIPB;
GN Name=Trim44; Synonyms=Dipb;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=Sprague-Dawley; TISSUE=Midbrain;
RA Ju S.K.;
RT "Cloning and sequencing of cDNA encoding DIPB from rat.";
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May play a role in the process of differentiation and
CC maturation of neuronal cells (By similarity). May regulate the activity
CC of TRIM17 (By similarity). Is a negative regulator of PAX6 expression
CC (By similarity). {ECO:0000250|UniProtKB:Q96DX7}.
CC -!- SUBUNIT: Interacts (via coiled coil) with TRIM17 (via coiled coil).
CC {ECO:0000250|UniProtKB:Q96DX7}.
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DR EMBL; AY551091; AAS58454.1; -; mRNA.
DR RefSeq; NP_001013221.1; NM_001013203.1.
DR AlphaFoldDB; Q6QA27; -.
DR SMR; Q6QA27; -.
DR STRING; 10116.ENSRNOP00000007018; -.
DR PaxDb; Q6QA27; -.
DR Ensembl; ENSRNOT00000007018; ENSRNOP00000007018; ENSRNOG00000005191.
DR GeneID; 362172; -.
DR KEGG; rno:362172; -.
DR UCSC; RGD:1304877; rat.
DR CTD; 54765; -.
DR RGD; 1304877; Trim44.
DR eggNOG; ENOG502RHR7; Eukaryota.
DR InParanoid; Q6QA27; -.
DR OrthoDB; 869824at2759; -.
DR PhylomeDB; Q6QA27; -.
DR TreeFam; TF333911; -.
DR PRO; PR:Q6QA27; -.
DR Proteomes; UP000002494; Chromosome 3.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0061944; P:negative regulation of protein K48-linked ubiquitination; ISO:RGD.
DR GO; GO:0001961; P:positive regulation of cytokine-mediated signaling pathway; ISO:RGD.
DR GO; GO:0002230; P:positive regulation of defense response to virus by host; ISO:RGD.
DR GO; GO:1901224; P:positive regulation of NIK/NF-kappaB signaling; ISO:RGD.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; ISO:RGD.
DR GO; GO:0050821; P:protein stabilization; ISO:RGD.
DR GO; GO:0016567; P:protein ubiquitination; IBA:GO_Central.
DR GO; GO:0010468; P:regulation of gene expression; ISO:RGD.
DR InterPro; IPR000315; Znf_B-box.
DR Pfam; PF00643; zf-B_box; 1.
DR SMART; SM00336; BBOX; 1.
DR PROSITE; PS50119; ZF_BBOX; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Metal-binding; Phosphoprotein; Reference proteome; Zinc;
KW Zinc-finger.
FT CHAIN 1..344
FT /note="Tripartite motif-containing protein 44"
FT /id="PRO_0000220374"
FT ZN_FING 174..215
FT /note="B box-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00024"
FT REGION 69..165
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 309..344
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 290..325
FT /evidence="ECO:0000255"
FT COMPBIAS 91..165
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 320..334
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 179
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00024"
FT BINDING 182
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00024"
FT BINDING 201
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00024"
FT BINDING 207
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00024"
FT MOD_RES 336
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q9QXA7"
FT MOD_RES 339
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q9QXA7"
SQ SEQUENCE 344 AA; 38086 MW; FAC0A10A08800EF3 CRC64;
MASGVGAACE ELPPDGTCDE CEPDEAPGAE EVCRDCGFCY CRRHADAHRQ KFLSHRLAAY
VHGAQAWTPP ASGDDALPED VEAKGEAEGE VESEVGEEES ESEVDSESEE ESETEEDSED
ESDEESEEDS EEEMEDEQES EAEEDNQEGE SEAEGETEAE SEFDPEIEME AERVAKRKCP
DHGLDLSTYC QEDRQLICVL CPVIGAHRGH QLSTLDEAFE ELRSKDSGGL KAAMIELVER
LKFKSSDPKV TRDQMKVFIQ QEFKKVQKVI ADEEQKALHL VDIQEAMATA HVTEILADIQ
SHMDRLMTQM AQAKEQLDTS NESAEPKAEG DEEGPSGASE EEDT