TRL31_ARATH
ID TRL31_ARATH Reviewed; 210 AA.
AC Q9FG36; A0JQ77; B9DGA5; Q9SWQ2; Q9XFI2;
DT 31-AUG-2004, integrated into UniProtKB/Swiss-Prot.
DT 15-JUN-2010, sequence version 3.
DT 03-AUG-2022, entry version 136.
DE RecName: Full=Thioredoxin-like 3-1, chloroplastic;
DE AltName: Full=Thioredoxin WCRKC-1;
DE Flags: Precursor;
GN Name=WCRKC1; OrderedLocusNames=At5g06690; ORFNames=MPH15.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF Clones.";
RL Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 4-210, AND NUCLEOTIDE SEQUENCE [GENOMIC DNA]
RP OF 87-202.
RX PubMed=10498962; DOI=10.1016/s1360-1385(99)01475-2;
RA Meyer Y., Verdoucq L., Vignols F.;
RT "Plant thioredoxins and glutaredoxins: identity and putative roles.";
RL Trends Plant Sci. 4:388-394(1999).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 42-210.
RC STRAIN=cv. Columbia;
RX PubMed=19423640; DOI=10.1093/dnares/dsp009;
RA Iida K., Fukami-Kobayashi K., Toyoda A., Sakaki Y., Kobayashi M., Seki M.,
RA Shinozaki K.;
RT "Analysis of multiple occurrences of alternative splicing events in
RT Arabidopsis thaliana using novel sequenced full-length cDNAs.";
RL DNA Res. 16:155-164(2009).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19825616; DOI=10.1093/mp/ssn076;
RA Chibani K., Wingsle G., Jacquot J.P., Gelhaye E., Rouhier N.;
RT "Comparative genomic study of the thioredoxin family in photosynthetic
RT organisms with emphasis on Populus trichocarpa.";
RL Mol. Plant 2:308-322(2009).
RN [7]
RP SUBCELLULAR LOCATION.
RX PubMed=19259774; DOI=10.1007/s11103-009-9471-4;
RA Cain P., Hall M., Schroder W.P., Kieselbach T., Robinson C.;
RT "A novel extended family of stromal thioredoxins.";
RL Plant Mol. Biol. 70:273-281(2009).
CC -!- FUNCTION: Probable thiol-disulfide oxidoreductase that may participate
CC in various redox reactions.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma
CC {ECO:0000269|PubMed:19259774}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q9FG36-1; Sequence=Displayed;
CC -!- SIMILARITY: Belongs to the thioredoxin family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD35009.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=BAB09803.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP002032; BAB09803.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED91050.1; -; Genomic_DNA.
DR EMBL; BT029447; ABK59676.1; -; mRNA.
DR EMBL; AF144391; AAD35009.1; ALT_INIT; mRNA.
DR EMBL; AF144393; AAD37584.1; -; Genomic_DNA.
DR EMBL; AK317080; BAH19772.1; -; mRNA.
DR RefSeq; NP_568172.1; NM_120752.4. [Q9FG36-1]
DR AlphaFoldDB; Q9FG36; -.
DR SMR; Q9FG36; -.
DR BioGRID; 15837; 1.
DR STRING; 3702.AT5G06690.2; -.
DR iPTMnet; Q9FG36; -.
DR PaxDb; Q9FG36; -.
DR PRIDE; Q9FG36; -.
DR ProteomicsDB; 246382; -. [Q9FG36-1]
DR EnsemblPlants; AT5G06690.1; AT5G06690.1; AT5G06690. [Q9FG36-1]
DR GeneID; 830558; -.
DR Gramene; AT5G06690.1; AT5G06690.1; AT5G06690. [Q9FG36-1]
DR KEGG; ath:AT5G06690; -.
DR Araport; AT5G06690; -.
DR eggNOG; KOG0907; Eukaryota.
DR HOGENOM; CLU_090389_3_0_1; -.
DR InParanoid; Q9FG36; -.
DR PhylomeDB; Q9FG36; -.
DR PRO; PR:Q9FG36; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FG36; baseline and differential.
DR Genevisible; Q9FG36; AT.
DR GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR InterPro; IPR013766; Thioredoxin_domain.
DR InterPro; IPR044253; WCRKC1/2.
DR PANTHER; PTHR47192; PTHR47192; 1.
DR Pfam; PF00085; Thioredoxin; 1.
DR SUPFAM; SSF52833; SSF52833; 1.
DR PROSITE; PS51352; THIOREDOXIN_2; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Chloroplast; Disulfide bond; Electron transport;
KW Plastid; Redox-active center; Reference proteome; Transit peptide;
KW Transport.
FT TRANSIT 1..?
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN ?..210
FT /note="Thioredoxin-like 3-1, chloroplastic"
FT /id="PRO_0000034169"
FT DOMAIN 81..210
FT /note="Thioredoxin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT ACT_SITE 130
FT /note="Nucleophile"
FT /evidence="ECO:0000255"
FT ACT_SITE 133
FT /note="Nucleophile"
FT /evidence="ECO:0000255"
FT DISULFID 130..133
FT /note="Redox-active"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT CONFLICT 117
FT /note="L -> V (in Ref. 4; AAD35009/AAD37584)"
FT /evidence="ECO:0000305"
FT CONFLICT 190
FT /note="I -> F (in Ref. 4; AAD37584)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 210 AA; 24517 MW; 7A73465BE81EF47D CRC64;
MAFENLKISR HISSSTKNLL KAKKIMAALA SNPQMLTRQA HGNKKEQLWR KESLNLEKKC
GFCVSVYSNE KLGRSHMEKE WRLKAFWSNI AQPTTLEMEP INNVEELDAV LSHARQLSQP
IIIEWMASWC RKCIYLKPKL EKLAAEYNNR AKFYYVDVNK VPQTLVKRGN ISKMPTIQLW
KEDEMKEEVI GGHKGWLVIE EVRELINKFV
