TRL31_ORYSJ
ID TRL31_ORYSJ Reviewed; 193 AA.
AC Q6Z7L3; Q0DX52;
DT 15-JUN-2010, integrated into UniProtKB/Swiss-Prot.
DT 15-JUN-2010, sequence version 2.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Thioredoxin-like 3-1, chloroplastic;
GN OrderedLocusNames=Os02g0774100, LOC_Os02g53400;
GN ORFNames=OJ1448_G06.8, OJ1611_C08.36;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19825616; DOI=10.1093/mp/ssn076;
RA Chibani K., Wingsle G., Jacquot J.P., Gelhaye E., Rouhier N.;
RT "Comparative genomic study of the thioredoxin family in photosynthetic
RT organisms with emphasis on Populus trichocarpa.";
RL Mol. Plant 2:308-322(2009).
CC -!- FUNCTION: Probable thiol-disulfide oxidoreductase that may participate
CC in various redox reactions.
CC -!- SIMILARITY: Belongs to the thioredoxin family. {ECO:0000305}.
CC -!- CAUTION: The active site contains a CRKC motif wich differs from the
CC conserved CGPC motif. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD16882.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAD17138.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAF10186.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP004068; BAD16882.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP004853; BAD17138.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008208; BAF10186.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014958; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_015623260.1; XM_015767774.1.
DR AlphaFoldDB; Q6Z7L3; -.
DR SMR; Q6Z7L3; -.
DR STRING; 4530.OS02T0774100-00; -.
DR PaxDb; Q6Z7L3; -.
DR PRIDE; Q6Z7L3; -.
DR GeneID; 4330886; -.
DR KEGG; osa:4330886; -.
DR eggNOG; KOG0907; Eukaryota.
DR HOGENOM; CLU_090389_3_0_1; -.
DR InParanoid; Q6Z7L3; -.
DR OrthoDB; 1218391at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR Genevisible; Q6Z7L3; OS.
DR GO; GO:0009570; C:chloroplast stroma; IEA:InterPro.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR InterPro; IPR013766; Thioredoxin_domain.
DR InterPro; IPR044253; WCRKC1/2.
DR PANTHER; PTHR47192; PTHR47192; 1.
DR Pfam; PF00085; Thioredoxin; 1.
DR SUPFAM; SSF52833; SSF52833; 1.
DR PROSITE; PS51352; THIOREDOXIN_2; 1.
PE 3: Inferred from homology;
KW Disulfide bond; Electron transport; Redox-active center;
KW Reference proteome; Transport.
FT CHAIN 1..193
FT /note="Thioredoxin-like 3-1, chloroplastic"
FT /id="PRO_0000394840"
FT DOMAIN 17..193
FT /note="Thioredoxin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT ACT_SITE 114
FT /note="Nucleophile"
FT /evidence="ECO:0000255"
FT ACT_SITE 117
FT /note="Nucleophile"
FT /evidence="ECO:0000255"
FT DISULFID 114..117
FT /note="Redox-active"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
SQ SEQUENCE 193 AA; 21233 MW; E82764B37EF0ADEA CRC64;
MALIAPSPRV LRAREAPAAG ALQPPAAACS TVAGGGGAAG RPLGMWSGGG GGGGGKGRRR
ERGDGMLRAE AYFWDVSKPV EMEEIDSMEK LDDALRWSVE NKQPIIIDWM ASWCRKCIYL
KPRLEKIAGE FPGVRFYFVD VNKVPQTVVK RGNITKMPTI QLWKDGEWAA EVIGGHKAWL
VMDEVREMIQ KHK