TRM1_BHV2B
ID TRM1_BHV2B Reviewed; 664 AA.
AC P17587;
DT 01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1990, sequence version 1.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=Tripartite terminase subunit 1 {ECO:0000255|HAMAP-Rule:MF_04014};
GN Name=TRM1 {ECO:0000255|HAMAP-Rule:MF_04014}; OrderedLocusNames=UL28;
OS Bovine herpesvirus 2 (strain BMV) (BoHV-2) (Bovine mammillitis virus).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus.
OX NCBI_TaxID=10296;
OH NCBI_TaxID=9913; Bos taurus (Bovine).
RN [1]
RP NUCLEOTIDE SEQUENCE.
RX PubMed=2841793; DOI=10.1016/0042-6822(88)90583-1;
RA Hammerschmidt W., Conraths F., Mankertz J., Pauli G., Ludwig H.,
RA Buhk H.-J.;
RT "Conservation of a gene cluster including glycoprotein B in bovine
RT herpesvirus type 2 (BHV-2) and herpes simplex virus type 1 (HSV-1).";
RL Virology 165:388-405(1988).
CC -!- FUNCTION: Component of the molecular motor that translocates viral
CC genomic DNA in empty capsid during DNA packaging. Forms a tripartite
CC terminase complex together with TRM2 and TRM3 in the host cytoplasm.
CC Once the complex reaches the host nucleus, it interacts with the capsid
CC portal vertex. This portal forms a ring in which genomic DNA is
CC translocated into the capsid. TRM1 carries an endonuclease activity
CC that plays an important role for the cleavage of concatemeric viral DNA
CC into unit length genomes. {ECO:0000255|HAMAP-Rule:MF_04014}.
CC -!- SUBUNIT: Associates with TRM2 and TRM3 to form the tripartite terminase
CC complex. Interacts with portal protein. {ECO:0000255|HAMAP-
CC Rule:MF_04014}.
CC -!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000255|HAMAP-Rule:MF_04014}.
CC Note=Found associated with the external surface of the viral capsid
CC during assembly and DNA packaging, but seems absent in extracellular
CC mature virions. {ECO:0000255|HAMAP-Rule:MF_04014}.
CC -!- SIMILARITY: Belongs to the herpesviridae TRM1 protein family.
CC {ECO:0000255|HAMAP-Rule:MF_04014}.
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DR PIR; B29242; WMBEBH.
DR SMR; P17587; -.
DR PRIDE; P17587; -.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016485; P:protein processing; IEA:UniProtKB-UniRule.
DR GO; GO:0019069; P:viral capsid assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0019073; P:viral DNA genome packaging; IEA:InterPro.
DR GO; GO:0019076; P:viral release from host cell; IEA:UniProtKB-UniRule.
DR HAMAP; MF_04014; HSV_TRM1; 1.
DR InterPro; IPR000501; UL28/UL56.
DR Pfam; PF01366; PRTP; 1.
PE 3: Inferred from homology;
KW ATP-binding; Host nucleus; Late protein; Metal-binding; Nucleotide-binding;
KW Viral genome packaging; Viral release from host cell; Zinc; Zinc-finger.
FT CHAIN 1..664
FT /note="Tripartite terminase subunit 1"
FT /id="PRO_0000115878"
FT ZN_FING 205..233
FT /note="C3H1-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04014"
FT REGION 273..295
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 440..466
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 446..461
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 664 AA; 72368 MW; A84F7ED8EBE24D29 CRC64;
MADAFDPSDT RPDELAAVAR QKLLVVLGQL QTYIFQVELL KRCDPQVARH QIGKLKLNAL
QVRAVSRHFM EGMSSQAATL ITPLTLALEL SLEYARREGE KLLEALNDLG ERSSPVAYFE
GTMGLARGCP HHQAVKLATY GGEIDKELCF LHDVENFLKQ MNYCHLITPA SAAAEALVSV
KAFLARTVGS ELIVPPEISD PSHPCHVCFE ELCVTANQGA TASRRLAGKI CDHVTQQARV
RLDADEMRRN LPHVVGLSEA RRARALHALE VSSKMTEANS GGPAEAPGPA AAQEREASAL
LDAHHVFKSA PPGLYAVSEL RFWLSSGDRT SGSTVDAFAD NLSALAERER RYETGAVAVE
LAAFGRRGEH FDRTFGDRVA SLDMVDALFV GGQSAAPDDQ IEALVRACYN HHLSAPVLRQ
LAGSEHGDAE ALRSALEGLH AAEDPPGDGN AEKEARRAPS LGGGPEDDWA ALAARAAADV
GARRRLYADR LTKRSLASLG RCVREQRGEL EKMLRVSTYG EVLPTVFAAV CNGFAARTRF
CELTARAGTV IDNRGNPDTF DTHRFMRASL MRHRVDPALL PGITHQFFEL VNGPLFDHAT
HGFAQPPNTA LYFSVENVGL LPHLKEELAR FMMGKADSDW AISEFQKFYH FDGTSGITPT
QRIA