TRM1_EHV2
ID TRM1_EHV2 Reviewed; 728 AA.
AC Q66612;
DT 08-MAR-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=Tripartite terminase subunit 1 {ECO:0000255|HAMAP-Rule:MF_04014};
GN Name=TRM1 {ECO:0000255|HAMAP-Rule:MF_04014}; OrderedLocusNames=7;
OS Equine herpesvirus 2 (strain 86/87) (EHV-2).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Gammaherpesvirinae; Percavirus.
OX NCBI_TaxID=82831;
OH NCBI_TaxID=9796; Equus caballus (Horse).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=7783207; DOI=10.1006/jmbi.1995.0314;
RA Telford E.A.R., Watson M.S., Aird H.C., Perry J., Davison A.J.;
RT "The DNA sequence of equine herpesvirus 2.";
RL J. Mol. Biol. 249:520-528(1995).
CC -!- FUNCTION: Component of the molecular motor that translocates viral
CC genomic DNA in empty capsid during DNA packaging. Forms a tripartite
CC terminase complex together with TRM2 and TRM3 in the host cytoplasm.
CC Once the complex reaches the host nucleus, it interacts with the capsid
CC portal vertex. This portal forms a ring in which genomic DNA is
CC translocated into the capsid. TRM1 carries an endonuclease activity
CC that plays an important role for the cleavage of concatemeric viral DNA
CC into unit length genomes. {ECO:0000255|HAMAP-Rule:MF_04014}.
CC -!- SUBUNIT: Associates with TRM2 and TRM3 to form the tripartite terminase
CC complex. Interacts with portal protein. {ECO:0000255|HAMAP-
CC Rule:MF_04014}.
CC -!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000255|HAMAP-Rule:MF_04014}.
CC Note=Found associated with the external surface of the viral capsid
CC during assembly and DNA packaging, but seems absent in extracellular
CC mature virions. {ECO:0000255|HAMAP-Rule:MF_04014}.
CC -!- SIMILARITY: Belongs to the herpesviridae TRM1 protein family.
CC {ECO:0000255|HAMAP-Rule:MF_04014}.
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DR EMBL; U20824; AAC13794.1; -; Genomic_DNA.
DR PIR; S55601; S55601.
DR RefSeq; NP_042603.1; NC_001650.2.
DR SMR; Q66612; -.
DR GeneID; 1461062; -.
DR KEGG; vg:1461062; -.
DR Proteomes; UP000007083; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016485; P:protein processing; IEA:UniProtKB-UniRule.
DR GO; GO:0019069; P:viral capsid assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0019073; P:viral DNA genome packaging; IEA:InterPro.
DR GO; GO:0019076; P:viral release from host cell; IEA:UniProtKB-UniRule.
DR HAMAP; MF_04014; HSV_TRM1; 1.
DR InterPro; IPR000501; UL28/UL56.
DR Pfam; PF01366; PRTP; 1.
PE 3: Inferred from homology;
KW ATP-binding; Host nucleus; Late protein; Metal-binding; Nucleotide-binding;
KW Reference proteome; Viral genome packaging; Viral release from host cell;
KW Zinc; Zinc-finger.
FT CHAIN 1..728
FT /note="Tripartite terminase subunit 1"
FT /id="PRO_0000406035"
FT ZN_FING 186..214
FT /note="C3H1-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04014"
FT REGION 239..278
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 257..272
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 653..660
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04014"
SQ SEQUENCE 728 AA; 79676 MW; 30455CF3D696CE23 CRC64;
MARELAAVYA QVFDLAAEVS LLGYCDPSSI DKRCVMANSN KVFKLCESLL PCLRLQNDTE
CSPLSLELQH LLQNTREALG VLTDLLSGDP SRSEYFEALH PSRPLEGPCK RHARVRVPFY
GGAEKTVSLS LLNDVEVFFK RLNSVFYCLP AEGALEALGE TVAFLGRLRG VSPIPPADAY
VSSVPCASCF AEAAMLPNQG ESVLSMLAAV NCNHVCRQVP SDPVIGVFEN ELRHLGADAR
AAGRAGGGRE SERRGREDAD DEEDDEEEPR DGQGDAGDGA ALRVLTESSL SVLAGHTIFE
EEDGRLAEIS NLVYWSSAAD RGGVGGTARA TSSSHMAKLF AHEARMHRSR AWLGRGAPSH
FFDAHRPSPL ESLFCGGVFN SIDDTIAALQ KDCSATFLKK SNYQTLIQQQ NELYVRLNEV
LNGAGRDEGG AKGAEAIADA EPLKPDGGAS CDPRDVLSDA RVRRDLYLKK LTRDGLRRLT
DCIETHGRVL SDTLSLRVWG SALYASAARL VNHFLFRRQF VGLGWADLTA GGEAAFENSK
YIKNALHGQR LNREHLDSIV VHFYRLITGP LSLQNSHFPV PDNVALAYCL DAAGAMPHQK
LVITEMIWPG IESKDWIDCN FNSFYSIETG DLNLTQKKTL NYIREAVLSI SLYNRVWEKS
LSLLSATELR GSCLAESASG ELGEGVYLTY EGTAPLVLVF DSKGYVFKDL YTLLYTHLQL
SGRRQASV