TRM3_EHV2
ID TRM3_EHV2 Reviewed; 686 AA.
AC Q66632; Q66637;
DT 08-MAR-2011, integrated into UniProtKB/Swiss-Prot.
DT 08-MAR-2011, sequence version 2.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=Tripartite terminase subunit 3 {ECO:0000255|HAMAP-Rule:MF_04013};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_04013};
DE AltName: Full=Terminase large subunit {ECO:0000255|HAMAP-Rule:MF_04013};
GN Name=TRM3 {ECO:0000255|HAMAP-Rule:MF_04013}; OrderedLocusNames=29a/29b;
OS Equine herpesvirus 2 (strain 86/87) (EHV-2).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Gammaherpesvirinae; Percavirus.
OX NCBI_TaxID=82831;
OH NCBI_TaxID=9796; Equus caballus (Horse).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=7783207; DOI=10.1006/jmbi.1995.0314;
RA Telford E.A.R., Watson M.S., Aird H.C., Perry J., Davison A.J.;
RT "The DNA sequence of equine herpesvirus 2.";
RL J. Mol. Biol. 249:520-528(1995).
RN [2]
RP SEQUENCE REVISION.
RA Davison A.J.;
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the molecular motor that translocates viral
CC genomic DNA in empty capsid during DNA packaging. Forms a tripartite
CC terminase complex together with TRM1 and TRM2 in the host cytoplasm.
CC Once the complex reaches the host nucleus, it interacts with the capsid
CC portal vertex. This portal forms a ring in which genomic DNA is
CC translocated into the capsid. TRM3 carries an RNase H-like nuclease
CC activity that plays an important role for the cleavage of concatemeric
CC viral DNA into unit length genomes. {ECO:0000255|HAMAP-Rule:MF_04013}.
CC -!- SUBUNIT: Interacts with the terminase subunits TRM1 and TRM2. Interacts
CC with portal protein. {ECO:0000255|HAMAP-Rule:MF_04013}.
CC -!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000255|HAMAP-Rule:MF_04013}.
CC Note=Responsible for the nuclear localization of the two others
CC subunits TRM1 and TRM2. {ECO:0000255|HAMAP-Rule:MF_04013}.
CC -!- SIMILARITY: Belongs to the herpesviridae TRM3 protein family.
CC {ECO:0000255|HAMAP-Rule:MF_04013}.
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DR EMBL; U20824; AAC13821.2; -; Genomic_DNA.
DR PIR; S55628; S55628.
DR RefSeq; NP_042630.2; NC_001650.2.
DR SMR; Q66632; -.
DR PRIDE; Q66632; -.
DR GeneID; 1461057; -.
DR KEGG; vg:1461057; -.
DR Proteomes; UP000007083; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0051276; P:chromosome organization; IEA:InterPro.
DR GO; GO:0019076; P:viral release from host cell; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.420.320; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_04013; HSV_TRM3; 1.
DR InterPro; IPR003498; DNA_pack_C.
DR InterPro; IPR038435; DNA_pack_C_sf.
DR InterPro; IPR003499; DNA_pack_N.
DR InterPro; IPR033663; HSV_TRM3.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF02499; DNA_pack_C; 1.
DR Pfam; PF02500; DNA_pack_N; 1.
PE 3: Inferred from homology;
KW DNA-binding; Host nucleus; Hydrolase; Reference proteome;
KW Viral genome packaging; Viral release from host cell.
FT CHAIN 1..686
FT /note="Tripartite terminase subunit 3"
FT /id="PRO_0000406059"
FT MOTIF 219..226
FT /note="Walker A motif"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04013"
FT MOTIF 314..319
FT /note="Walker B motif"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04013"
FT ACT_SITE 319
FT /note="For ATPase activity"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04013"
FT ACT_SITE 475
FT /note="For nuclease activity"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04013"
FT ACT_SITE 548
FT /note="For nuclease activity"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04013"
FT ACT_SITE 660
FT /note="For nuclease activity"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04013"
SQ SEQUENCE 686 AA; 76458 MW; BC38099FB2A57A3A CRC64;
MILSGKKRML LDNYKNARAP GGDDERDWVF DRPAIVTRRD KSDRMAHPYI GIIPRTNIYS
AVLDSYCKSL NPVYKERIPP VLGTGRDVPV TPANVTGELA RAARALCGDL ASGDPEALVE
FASAVQTQRT SRGCPVFREL SEFLVNLASF LNRCYSVKSD TIEPFQKQLI LHTFYFLISI
KAPHAANTLF EVFKEYFGLF DMGREALQTF KQKSTVYLIP RRHGKTWIVV AIISMLLTSV
ENIHVGYVAH QKHVANSVFA EIINTIYRWF PAKNVYIKKE NGTIMYTNEN RRPSTLMCAT
CFNKNSIRGQ TFNLLYVDEA NFIKKDSLPS ILGFMLQKDA KIIFISSVNS SDQTTSFLYN
LKNAKEKMLN VVNYVCPQHR EDFSLQESVV SCPCYRLHIP TYIAIDENIK DTTNLFMEGA
FTTELMGDGA AATTQTNMHK VVGEPALVQF DLCRVDTGSP EAQRGLNPTL FLYVDPAYTN
NTEASGTGMG AVVSMKNSDR CVVVGVEHFF LKELTGASSL QIASCAAALI RSLATLHPFV
REAHVAIEGN SSQDSAVAIA TLLHERSPLP VKFLHHADKA TGVQWPMYIL GAEKARAFET
FIYALNSNTL SCGQAIVSNT IKLSFDPVAY LIEQIRAIKC YPLKDGTVSY CAKHKGGSDD
TLVAVVMAHY FATSDRHVFK NHMKQI