TRM82_COCIM
ID TRM82_COCIM Reviewed; 520 AA.
AC Q1DXS8; J3KEY4;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2006, sequence version 1.
DT 25-MAY-2022, entry version 86.
DE RecName: Full=tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 {ECO:0000255|HAMAP-Rule:MF_03056};
DE AltName: Full=Transfer RNA methyltransferase 82 {ECO:0000255|HAMAP-Rule:MF_03056};
GN Name=TRM82 {ECO:0000255|HAMAP-Rule:MF_03056}; ORFNames=CIMG_04885;
OS Coccidioides immitis (strain RS) (Valley fever fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX NCBI_TaxID=246410;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RS;
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=RS;
RX PubMed=20516208; DOI=10.1101/gr.103911.109;
RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA Taylor J.W., Rounsley S.D.;
RT "Population genomic sequencing of Coccidioides fungi reveals recent
RT hybridization and transposon control.";
RL Genome Res. 20:938-946(2010).
CC -!- FUNCTION: Required for the formation of N(7)-methylguanine at position
CC 46 (m7G46) in tRNA. In the complex, it is required to stabilize and
CC induce conformational changes of the catalytic subunit.
CC {ECO:0000255|HAMAP-Rule:MF_03056}.
CC -!- PATHWAY: tRNA modification; N(7)-methylguanine-tRNA biosynthesis.
CC {ECO:0000255|HAMAP-Rule:MF_03056}.
CC -!- SUBUNIT: Forms a heterodimer with the catalytic subunit TRM8.
CC {ECO:0000255|HAMAP-Rule:MF_03056}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|HAMAP-Rule:MF_03056}.
CC -!- SIMILARITY: Belongs to the WD repeat TRM82 family. {ECO:0000255|HAMAP-
CC Rule:MF_03056}.
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DR EMBL; GG704914; EAS33861.3; -; Genomic_DNA.
DR RefSeq; XP_001245444.1; XM_001245443.2.
DR AlphaFoldDB; Q1DXS8; -.
DR STRING; 246410.Q1DXS8; -.
DR EnsemblFungi; EAS33861; EAS33861; CIMG_04885.
DR GeneID; 4563280; -.
DR KEGG; cim:CIMG_04885; -.
DR VEuPathDB; FungiDB:CIMG_04885; -.
DR InParanoid; Q1DXS8; -.
DR OMA; WVFEHDG; -.
DR OrthoDB; 937275at2759; -.
DR UniPathway; UPA00989; -.
DR Proteomes; UP000001261; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0036265; P:RNA (guanine-N7)-methylation; IEA:InterPro.
DR GO; GO:0030488; P:tRNA methylation; IEA:UniProtKB-UniRule.
DR Gene3D; 2.130.10.10; -; 1.
DR HAMAP; MF_03056; TRM82; 1.
DR InterPro; IPR028884; Trm82.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR16288; PTHR16288; 1.
DR SMART; SM00320; WD40; 3.
DR SUPFAM; SSF50978; SSF50978; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Repeat; tRNA processing; WD repeat.
FT CHAIN 1..520
FT /note="tRNA (guanine-N(7)-)-methyltransferase non-catalytic
FT subunit TRM82"
FT /id="PRO_0000370518"
FT REPEAT 105..145
FT /note="WD 1"
FT REPEAT 244..291
FT /note="WD 2"
FT REPEAT 296..338
FT /note="WD 3"
FT REGION 51..102
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 84..102
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 520 AA; 56257 MW; CA2E580AC806B332 CRC64;
MSLRYPISRI RHFRCQLREL LAAVAGPSIR IFDAGTGSLL SSWPPASYMR PLDSEISPDR
ASSAGTCAEP PEKRRKLTPP VDESGEAQTE QSAKAKARKS QTAEQAWSTI PILVISGTGD
HIVAVTGEDK CLRVFEVKQD GKLTQLTERC IPKRPCAISL TPDNNTILCG DKFGDVYSLP
LLPRDEVVLP LRKAAESSKP FQPSATKLTV HTQRNLKALE QQLRTPRAAQ EKLEPSFQHR
LLLGHVSMLT DLILAPVPSD SSTSPRLYII TSDRDEHIRV SRGPSQAHII HGYCLGHTSF
VSKLCIPPWD PRSLISGGGD NCIICWDWLA GRVAQTIPLV HDGDVAESTK AQPPQSDAPD
IAVSGIYAIP FSGNPGLTEH ASGGILVALE GVSRLLAFSF GTNGRLTALA PIELSGNALD
VVALDDRGTI LVSVDNVHKP GSTKELRDSA IGPKLLQCFS ARSDGGLKWE ESSTQAATTI
NSREAVDIIA ETESRKQVQK ISDSLYGIGN LRKWARGEDG