BURP3_ORYSJ
ID BURP3_ORYSJ Reviewed; 429 AA.
AC Q942D4; A0A0P0V7T9; A2ZXJ3;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=BURP domain-containing protein 3;
DE Short=OsBURP03;
DE Flags: Precursor;
GN Name=BURP3; OrderedLocusNames=Os01g0733500, LOC_Os01g53240;
GN ORFNames=B1060H01.8, OsJ_03360, OSJNBb0036G09.19;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP TISSUE SPECIFICITY, AND GENE NOMENCLATURE.
RX PubMed=19363683; DOI=10.1007/s00425-009-0929-z;
RA Ding X., Hou X., Xie K., Xiong L.;
RT "Genome-wide identification of BURP domain-containing genes in rice reveals
RT a gene family with diverse structures and responses to abiotic stresses.";
RL Planta 230:149-163(2009).
CC -!- TISSUE SPECIFICITY: Expressed in stems, leaves, shoot, panicles and
CC stamen. {ECO:0000269|PubMed:19363683}.
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DR EMBL; AP003309; BAB89935.1; -; Genomic_DNA.
DR EMBL; AP003560; BAB68072.1; -; Genomic_DNA.
DR EMBL; AP008207; BAF06075.1; -; Genomic_DNA.
DR EMBL; AP014957; BAS74205.1; -; Genomic_DNA.
DR EMBL; CM000138; EAZ13440.1; -; Genomic_DNA.
DR EMBL; AK065358; BAG89485.1; -; mRNA.
DR EMBL; AK106043; BAG97527.1; -; mRNA.
DR RefSeq; XP_015630857.1; XM_015775371.1.
DR AlphaFoldDB; Q942D4; -.
DR STRING; 4530.OS01T0733500-01; -.
DR PaxDb; Q942D4; -.
DR PRIDE; Q942D4; -.
DR EnsemblPlants; Os01t0733500-01; Os01t0733500-01; Os01g0733500.
DR GeneID; 4324159; -.
DR Gramene; Os01t0733500-01; Os01t0733500-01; Os01g0733500.
DR KEGG; osa:4324159; -.
DR eggNOG; ENOG502QQHP; Eukaryota.
DR HOGENOM; CLU_011822_1_1_1; -.
DR InParanoid; Q942D4; -.
DR OMA; NVAPFIY; -.
DR OrthoDB; 781608at2759; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000007752; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR Genevisible; Q942D4; OS.
DR InterPro; IPR044816; BURP.
DR InterPro; IPR004873; BURP_dom.
DR PANTHER; PTHR31236; PTHR31236; 1.
DR Pfam; PF03181; BURP; 1.
DR SMART; SM01045; BURP; 1.
DR PROSITE; PS51277; BURP; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Signal.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..429
FT /note="BURP domain-containing protein 3"
FT /id="PRO_0000375830"
FT DOMAIN 213..428
FT /note="BURP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00604"
FT REGION 59..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 288
FT /note="E -> K (in Ref. 5; EAZ13440)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 429 AA; 43523 MW; 7407766374F22BB1 CRC64;
MDRLLACLLG FLLIASVGSH AARTPEQYWK SALPNSPIPS SLSQLLSTAG GGTSVNVGGG
GVHVDAGHGK PGGTTVDVGK GGVGVNVKPG YGKPGGTTVG VGKGGVGVNV KPGYGKPGGT
SVGVGKGGVG VNVQPGYGKP GGTTVGVGKG GVGVNVQPGY GKPGGTTVGV GKGGVGVNVK
PRGKPVHVNV APFIYNYAAT ETQLHDDPNV ALFFLEKDLH PGKTMAVHFT ATTAGEKFLP
RSEADAMPFS SEKVPEILSR FSVKPGSVEA AEMAQTLRDC EAPPAQGERK ACATSLESMV
DFATSSLGTS HVRAASTVVG KEGSPEQEYT VTAVKRAAAG GDQDQLVACH AEPYAYAVFA
CHLTRATRAY AVSMAGRDGT GVEAVAVCHA DTAGWNPKHV AFQVLKVKPG TVPVCHFLPQ
DHVVWTRSG
