BURP4_ORYSJ
ID BURP4_ORYSJ Reviewed; 479 AA.
AC Q0E1Z0; Q6K8A3; Q6K8A4;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 17-OCT-2006, sequence version 1.
DT 25-MAY-2022, entry version 75.
DE RecName: Full=BURP domain-containing protein 4;
DE Short=OsBURP04;
DE Flags: Precursor;
GN Name=BURP4; OrderedLocusNames=Os02g0288600, LOC_Os02g18690;
GN ORFNames=OJ1756_H07.37, OJ1756_H07.38, OsJ_06300;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 280-479.
RC STRAIN=cv. Nipponbare;
RG The rice full-length cDNA consortium;
RT "Oryza sativa full length cDNA.";
RL Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP TISSUE SPECIFICITY, AND GENE NOMENCLATURE.
RX PubMed=19363683; DOI=10.1007/s00425-009-0929-z;
RA Ding X., Hou X., Xie K., Xiong L.;
RT "Genome-wide identification of BURP domain-containing genes in rice reveals
RT a gene family with diverse structures and responses to abiotic stresses.";
RL Planta 230:149-163(2009).
CC -!- TISSUE SPECIFICITY: Expressed in stamen. {ECO:0000269|PubMed:19363683}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD21725.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAD21726.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAF08498.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP004168; BAD21725.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP004168; BAD21726.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008208; BAF08498.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014958; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM000139; EAZ22628.1; -; Genomic_DNA.
DR EMBL; AK288416; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015624887.1; XM_015769401.1.
DR AlphaFoldDB; Q0E1Z0; -.
DR STRING; 4530.OS02T0288600-01; -.
DR PaxDb; Q0E1Z0; -.
DR PRIDE; Q0E1Z0; -.
DR GeneID; 4329048; -.
DR KEGG; osa:4329048; -.
DR eggNOG; ENOG502QQHP; Eukaryota.
DR HOGENOM; CLU_011822_2_1_1; -.
DR InParanoid; Q0E1Z0; -.
DR OrthoDB; 1476698at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000007752; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR Genevisible; Q0E1Z0; OS.
DR InterPro; IPR044816; BURP.
DR InterPro; IPR004873; BURP_dom.
DR PANTHER; PTHR31236; PTHR31236; 1.
DR Pfam; PF03181; BURP; 1.
DR SMART; SM01045; BURP; 1.
DR PROSITE; PS51277; BURP; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Reference proteome; Signal.
FT SIGNAL 1..46
FT /evidence="ECO:0000255"
FT CHAIN 47..479
FT /note="BURP domain-containing protein 4"
FT /id="PRO_0000375831"
FT DOMAIN 254..479
FT /note="BURP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00604"
FT REGION 158..177
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 445
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 479 AA; 50346 MW; FB578F9537AFB9ED CRC64;
MVGKGNECAA ARRRFSLRAA AASSSSSSFL PCLLLAAALS AGCCRAHAAT ARAPRSLLAR
FPTTKMTSEL EKEAGRYVDD SSQAARTNNK ITNLQVSFVG HGHDTPADGE GQFADAAYPA
KWKPDQDPST PSLVVAHHLP NGNAPFIDAA YPVKWSPRAD GPPKQPATFP ASPNGEKAEF
TDSAYSVKWS PRSVAPPKAP GIFAQHSNGN KAQFTDAAYP VDWNPRSVAP PTPPAALSSL
AHPAAGIHIQ RGMLFLMKKL HPGAVLPEGT KLALPHGDHG VAAAAPRFIY KDKGDAVPFD
LRAMDAILAM FGILPGSDKA AQVADTLRAC SELTAAGGGG EEPRACCATS REAVLDFAAS
ALGTSAPRAV TTLVHGREPR RYVVAADGVA RIGGDAVVAC HPMPYLYEVY YCHRPADAVA
LRVDLHAVAD VGLGGATAVA VCHVNTTTWD SAYFELLKAS RGDAICHYMP QGYVLWLAN