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TRMBA_XENTR
ID   TRMBA_XENTR             Reviewed;         273 AA.
AC   Q28H76; Q6DFR8;
DT   05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT   05-MAY-2009, sequence version 2.
DT   03-AUG-2022, entry version 90.
DE   RecName: Full=tRNA (guanine-N(7)-)-methyltransferase A {ECO:0000255|HAMAP-Rule:MF_03055};
DE            EC=2.1.1.33 {ECO:0000255|HAMAP-Rule:MF_03055};
DE   AltName: Full=Methyltransferase-like protein 1-A {ECO:0000255|HAMAP-Rule:MF_03055};
DE   AltName: Full=mRNA (guanine-N(7)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_03055};
DE            EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_03055};
DE   AltName: Full=miRNA (guanine-N(7)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_03055};
DE            EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_03055};
DE   AltName: Full=tRNA (guanine(46)-N(7))-methyltransferase A {ECO:0000255|HAMAP-Rule:MF_03055};
DE   AltName: Full=tRNA(m7G46)-methyltransferase A {ECO:0000255|HAMAP-Rule:MF_03055};
GN   Name=mettl1-A; ORFNames=TEgg045g13.1;
OS   Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX   NCBI_TaxID=8364;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Egg;
RG   Sanger Xenopus tropicalis EST/cDNA project;
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Embryo;
RG   NIH - Xenopus Gene Collection (XGC) project;
RL   Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Methyltransferase that mediates the formation of N(7)-
CC       methylguanine in a subset of RNA species, such as tRNAs, mRNAs and
CC       microRNAs (miRNAs). Catalyzes the formation of N(7)-methylguanine at
CC       position 46 (m7G46) in tRNA. Also acts as a methyltransferase for a
CC       subset of internal N(7)-methylguanine in mRNAs. Internal N(7)-
CC       methylguanine methylation of mRNAs regulates translation. Also
CC       methylates a specific subset of miRNAs. {ECO:0000255|HAMAP-
CC       Rule:MF_03055}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=guanosine(46) in tRNA + S-adenosyl-L-methionine = N(7)-
CC         methylguanosine(46) in tRNA + S-adenosyl-L-homocysteine;
CC         Xref=Rhea:RHEA:42708, Rhea:RHEA-COMP:10188, Rhea:RHEA-COMP:10189,
CC         ChEBI:CHEBI:57856, ChEBI:CHEBI:59789, ChEBI:CHEBI:74269,
CC         ChEBI:CHEBI:74480; EC=2.1.1.33; Evidence={ECO:0000255|HAMAP-
CC         Rule:MF_03055};
CC   -!- PATHWAY: tRNA modification; N(7)-methylguanine-tRNA biosynthesis.
CC       {ECO:0000255|HAMAP-Rule:MF_03055}.
CC   -!- SUBUNIT: Forms a complex with wdr4. {ECO:0000255|HAMAP-Rule:MF_03055}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|HAMAP-Rule:MF_03055}.
CC   -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC       superfamily. TrmB family. {ECO:0000255|HAMAP-Rule:MF_03055}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAH76665.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC       Sequence=CAJ83619.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; CR761007; CAJ83619.1; ALT_INIT; mRNA.
DR   EMBL; BC076665; AAH76665.1; ALT_INIT; mRNA.
DR   RefSeq; NP_001006798.2; NM_001006797.2.
DR   AlphaFoldDB; Q28H76; -.
DR   SMR; Q28H76; -.
DR   STRING; 8364.ENSXETP00000014501; -.
DR   PaxDb; Q28H76; -.
DR   DNASU; 448504; -.
DR   GeneID; 448504; -.
DR   KEGG; xtr:448504; -.
DR   CTD; 4234; -.
DR   Xenbase; XB-GENE-1000662; mettl1.
DR   eggNOG; KOG3115; Eukaryota.
DR   HOGENOM; CLU_050910_3_1_1; -.
DR   InParanoid; Q28H76; -.
DR   OrthoDB; 1417652at2759; -.
DR   TreeFam; TF314083; -.
DR   UniPathway; UPA00989; -.
DR   Proteomes; UP000008143; Chromosome 2.
DR   Proteomes; UP000790000; Unplaced.
DR   GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR   GO; GO:0043527; C:tRNA methyltransferase complex; IBA:GO_Central.
DR   GO; GO:0008176; F:tRNA (guanine-N7-)-methyltransferase activity; ISS:UniProtKB.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0036265; P:RNA (guanine-N7)-methylation; IBA:GO_Central.
DR   GO; GO:0030488; P:tRNA methylation; IBA:GO_Central.
DR   GO; GO:0006400; P:tRNA modification; ISS:UniProtKB.
DR   Gene3D; 3.40.50.150; -; 1.
DR   HAMAP; MF_03055; tRNA_methyltr_TrmB_euk; 1.
DR   InterPro; IPR029063; SAM-dependent_MTases_sf.
DR   InterPro; IPR025763; Trm8_euk.
DR   InterPro; IPR003358; tRNA_(Gua-N-7)_MeTrfase_Trmb.
DR   PANTHER; PTHR23417; PTHR23417; 1.
DR   Pfam; PF02390; Methyltransf_4; 1.
DR   SUPFAM; SSF53335; SSF53335; 1.
DR   TIGRFAMs; TIGR00091; TIGR00091; 1.
DR   PROSITE; PS51625; SAM_MT_TRMB; 1.
PE   2: Evidence at transcript level;
KW   Methyltransferase; Nucleus; Reference proteome; RNA-binding;
KW   S-adenosyl-L-methionine; Transferase; tRNA processing; tRNA-binding.
FT   CHAIN           1..273
FT                   /note="tRNA (guanine-N(7)-)-methyltransferase A"
FT                   /id="PRO_0000370560"
FT   ACT_SITE        165
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03055"
FT   BINDING         86
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03055"
FT   BINDING         109..110
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03055"
FT   BINDING         142..143
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03055"
FT   BINDING         162
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03055"
FT   BINDING         240..242
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03055"
FT   CONFLICT        149
FT                   /note="N -> S (in Ref. 2; AAH76665)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   273 AA;  31697 MW;  79E31E012996D8D5 CRC64;
     MCNTQATPSD PGITVAHPKK RYYRQRAHSN PMADHTFQYP VKPEIMDWSE YYPDYFKPLV
     PDSAHDDAKD LQERKEQHQV EFADIGCGYG GLLVELSPLF PNTLMLGLEI RVKVSDYVQD
     RIKSLRASHL GQYQNIACIR SNAMKYIPNF FKKGQLSKMF FLFPDPHFKK TKHKWRIISP
     TLLAEYAYVL RIGGMVYTIT DVEEVHTWMV KHFTEHPLFE RVAKEELVND IVVGKLGTST
     EEGKKVQRNK GLNLLAVFRR IENSTFIQRD SQQ
 
 
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