BURPD_ORYSJ
ID BURPD_ORYSJ Reviewed; 412 AA.
AC Q7F8U7; A0A0P0XHH8;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=BURP domain-containing protein 13;
DE Short=OsBURP13;
DE AltName: Full=Protein RAFTIN 1;
DE Short=OsRAFTIN1;
DE Flags: Precursor;
GN Name=BURP13; Synonyms=RAFTIN1;
GN OrderedLocusNames=Os08g0496800, LOC_Os08g38810;
GN ORFNames=B1142B04.37, P0026F07.8;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], FUNCTION, TISSUE SPECIFICITY, AND
RP DISRUPTION PHENOTYPE.
RC STRAIN=cv. Nipponbare; TISSUE=Anther;
RX PubMed=14612572; DOI=10.1073/pnas.2231254100;
RA Wang A., Xia Q., Xie W., Datla R., Selvaraj G.;
RT "The classical Ubisch bodies carry a sporophytically produced structural
RT protein (RAFTIN) that is essential for pollen development.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:14487-14492(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP TISSUE SPECIFICITY, AND GENE NOMENCLATURE.
RX PubMed=19363683; DOI=10.1007/s00425-009-0929-z;
RA Ding X., Hou X., Xie K., Xiong L.;
RT "Genome-wide identification of BURP domain-containing genes in rice reveals
RT a gene family with diverse structures and responses to abiotic stresses.";
RL Planta 230:149-163(2009).
CC -!- FUNCTION: Required for pollen development. Probably synthesized in the
CC tapetum, packaged in Ubisch bodies and transported at appropriate
CC stages to the micropsores. {ECO:0000269|PubMed:14612572}.
CC -!- TISSUE SPECIFICITY: Specifically expressed in anthers, in the tapetum
CC and microspores (at protein level). {ECO:0000269|PubMed:14612572,
CC ECO:0000269|PubMed:19363683}.
CC -!- DISRUPTION PHENOTYPE: Collapsed pollen with low viability. Almost no
CC seed production. {ECO:0000269|PubMed:14612572}.
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DR EMBL; AJ575667; CAE02617.1; -; mRNA.
DR EMBL; AJ575668; CAE02618.1; -; Genomic_DNA.
DR EMBL; AP000364; BAD08707.1; -; Genomic_DNA.
DR EMBL; AP005148; BAD10134.1; -; Genomic_DNA.
DR EMBL; AP008214; BAF24051.1; -; Genomic_DNA.
DR EMBL; AP014964; BAT06071.1; -; Genomic_DNA.
DR RefSeq; XP_015649559.1; XM_015794073.1.
DR AlphaFoldDB; Q7F8U7; -.
DR STRING; 4530.OS08T0496800-01; -.
DR PaxDb; Q7F8U7; -.
DR PRIDE; Q7F8U7; -.
DR EnsemblPlants; Os08t0496800-01; Os08t0496800-01; Os08g0496800.
DR GeneID; 4345929; -.
DR Gramene; Os08t0496800-01; Os08t0496800-01; Os08g0496800.
DR KEGG; osa:4345929; -.
DR eggNOG; ENOG502QQHP; Eukaryota.
DR HOGENOM; CLU_011822_1_0_1; -.
DR InParanoid; Q7F8U7; -.
DR OMA; HIVWAKN; -.
DR OrthoDB; 1189903at2759; -.
DR PlantReactome; R-OSA-8986768; Anther and pollen development.
DR Proteomes; UP000000763; Chromosome 8.
DR Proteomes; UP000059680; Chromosome 8.
DR Genevisible; Q7F8U7; OS.
DR GO; GO:0043668; C:exine; ISS:UniProtKB.
DR GO; GO:0009555; P:pollen development; IBA:GO_Central.
DR GO; GO:0010152; P:pollen maturation; IMP:UniProtKB.
DR InterPro; IPR044816; BURP.
DR InterPro; IPR004873; BURP_dom.
DR PANTHER; PTHR31236; PTHR31236; 1.
DR Pfam; PF03181; BURP; 1.
DR SMART; SM01045; BURP; 1.
DR PROSITE; PS51277; BURP; 1.
PE 1: Evidence at protein level;
KW Glycoprotein; Reference proteome; Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..412
FT /note="BURP domain-containing protein 13"
FT /id="PRO_0000375840"
FT DOMAIN 190..406
FT /note="BURP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00604"
FT CARBOHYD 369
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 412 AA; 42330 MW; 8E1E94BD1D4F3155 CRC64;
MARFLLLLVA VAAAAAVLSL GDAAPSTAEV FWRAVLPESP LPDAFLRLLR PDTSFVVGKA
EAAGGAARTG FPFDYTDYRG SDSPTTASGL DLAGDFGEPA PFGYDYSAQG EGGGGGAAAA
AGEQVLAVDA GFNYDKYVGA RKLRGGSSTA GGENDDEPFG YDYKAPSSGS GTAASTTARG
VGTGATTTVF FHEEAVRVGE RLPFYFPAAT TSALGFLPRR VADSIPFTAA ALPAVLALFG
VAPDTAEAAG MRETLRTCEW PTLAGESKFC ATSLEALVEG AMAALGTRDI AALASTLPRG
GAPLQAYAVR AVLPVEGAGF VACHDQAYPY TVYRCHTTGP ARAYMVEMEG DGGGDGGEAV
TVATVCHTNT SRWNPEHVSF KLLGTKPGGS PVCHLMPYGH IVWAKNVKSS TA