TRPA_HALVD
ID TRPA_HALVD Reviewed; 277 AA.
AC P18284; D4GU19;
DT 01-NOV-1990, integrated into UniProtKB/Swiss-Prot.
DT 21-SEP-2011, sequence version 2.
DT 25-MAY-2022, entry version 117.
DE RecName: Full=Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131};
DE EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};
GN Name=trpA {ECO:0000255|HAMAP-Rule:MF_00131}; OrderedLocusNames=HVO_0789;
OS Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 /
OS NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales;
OC Haloferacaceae; Haloferax.
OX NCBI_TaxID=309800;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=DS2 / DSM 5716 / WFD11;
RX PubMed=2118654; DOI=10.1073/pnas.87.17.6614;
RA Lam W.L., Cohen A., Tsouluhas D., Doolittle W.F.;
RT "Genes for tryptophan biosynthesis in the archaebacterium Haloferax
RT volcanii.";
RL Proc. Natl. Acad. Sci. U.S.A. 87:6614-6618(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
RC B-1768 / DS2;
RX PubMed=20333302; DOI=10.1371/journal.pone.0009605;
RA Hartman A.L., Norais C., Badger J.H., Delmas S., Haldenby S., Madupu R.,
RA Robinson J., Khouri H., Ren Q., Lowe T.M., Maupin-Furlow J.,
RA Pohlschroder M., Daniels C., Pfeiffer F., Allers T., Eisen J.A.;
RT "The complete genome sequence of Haloferax volcanii DS2, a model
RT archaeon.";
RL PLoS ONE 5:E9605-E9605(2010).
RN [3]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RC STRAIN=DS2 / DS70;
RX PubMed=14766575; DOI=10.1128/aem.70.2.943-953.2004;
RA Allers T., Ngo H.-P., Mevarech M., Lloyd R.G.;
RT "Development of additional selectable markers for the halophilic archaeon
RT Haloferax volcanii based on the leuB and trpA genes.";
RL Appl. Environ. Microbiol. 70:943-953(2004).
CC -!- FUNCTION: The alpha subunit is responsible for the aldol cleavage of
CC indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate.
CC {ECO:0000255|HAMAP-Rule:MF_00131, ECO:0000269|PubMed:14766575}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate + L-serine = D-
CC glyceraldehyde 3-phosphate + H2O + L-tryptophan;
CC Xref=Rhea:RHEA:10532, ChEBI:CHEBI:15377, ChEBI:CHEBI:33384,
CC ChEBI:CHEBI:57912, ChEBI:CHEBI:58866, ChEBI:CHEBI:59776; EC=4.2.1.20;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00131};
CC -!- PATHWAY: Amino-acid biosynthesis; L-tryptophan biosynthesis; L-
CC tryptophan from chorismate: step 5/5. {ECO:0000255|HAMAP-
CC Rule:MF_00131}.
CC -!- SUBUNIT: Tetramer of two alpha and two beta chains. {ECO:0000255|HAMAP-
CC Rule:MF_00131}.
CC -!- DISRUPTION PHENOTYPE: Auxotrophic for tryptophan.
CC {ECO:0000269|PubMed:14766575}.
CC -!- SIMILARITY: Belongs to the TrpA family. {ECO:0000255|HAMAP-
CC Rule:MF_00131}.
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DR EMBL; M36177; AAA72864.1; -; Genomic_DNA.
DR EMBL; CP001956; ADE05134.1; -; Genomic_DNA.
DR PIR; A36044; A36044.
DR RefSeq; WP_004044148.1; NZ_AOHU01000097.1.
DR AlphaFoldDB; P18284; -.
DR SMR; P18284; -.
DR STRING; 309800.C498_14788; -.
DR EnsemblBacteria; ADE05134; ADE05134; HVO_0789.
DR GeneID; 8924299; -.
DR KEGG; hvo:HVO_0789; -.
DR eggNOG; arCOG01086; Archaea.
DR HOGENOM; CLU_016734_0_0_2; -.
DR OMA; LVMTYWN; -.
DR OrthoDB; 65368at2157; -.
DR UniPathway; UPA00035; UER00044.
DR Proteomes; UP000008243; Chromosome.
DR GO; GO:0004834; F:tryptophan synthase activity; IEA:UniProtKB-UniRule.
DR CDD; cd04724; Tryptophan_synthase_alpha; 1.
DR Gene3D; 3.20.20.70; -; 1.
DR HAMAP; MF_00131; Trp_synth_alpha; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR011060; RibuloseP-bd_barrel.
DR InterPro; IPR018204; Trp_synthase_alpha_AS.
DR InterPro; IPR002028; Trp_synthase_suA.
DR PANTHER; PTHR43406; PTHR43406; 1.
DR Pfam; PF00290; Trp_syntA; 1.
DR SUPFAM; SSF51366; SSF51366; 1.
DR TIGRFAMs; TIGR00262; trpA; 1.
DR PROSITE; PS00167; TRP_SYNTHASE_ALPHA; 1.
PE 3: Inferred from homology;
KW Amino-acid biosynthesis; Aromatic amino acid biosynthesis; Lyase;
KW Reference proteome; Tryptophan biosynthesis.
FT CHAIN 1..277
FT /note="Tryptophan synthase alpha chain"
FT /id="PRO_0000098887"
FT ACT_SITE 43
FT /note="Proton acceptor"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00131"
FT ACT_SITE 54
FT /note="Proton acceptor"
FT CONFLICT 92
FT /note="T -> R (in Ref. 1; AAA72864)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 277 AA; 29665 MW; 27552AE527C8A861 CRC64;
MSLEDAFSDG PAFVPYLAAG DPDYESSLEY VEALERGGAD VIELGLPFSE PIAEGPTIQN
AVVRSLEGGM TPTRFFEFVE DLDVSVPLVC MTYYNLIYRY GDEPGPRPFV EKAAEVGIEG
FVVPDLPAEE AGPLREACDE FGLDLVFIVA PTTRGERLDR IMEQVSGYVY VQARLGTTGA
QSSVSDQTDS SLERLTDYDV PKAVGFGISD GDHAERIVAS GADGIIVGSA LVDIVAEGHE
NGDDAETVAD RLETLARELE DGAVAGASQR PPHPERT