TRPB1_THEKO
ID TRPB1_THEKO Reviewed; 389 AA.
AC Q9YGB0;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1999, sequence version 1.
DT 03-AUG-2022, entry version 136.
DE RecName: Full=Tryptophan synthase beta chain 1 {ECO:0000255|HAMAP-Rule:MF_00133};
DE EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00133};
GN Name=trpB1 {ECO:0000255|HAMAP-Rule:MF_00133}; Synonyms=trpB;
GN OrderedLocusNames=TK0257;
OS Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
OS (Pyrococcus kodakaraensis (strain KOD1)).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Thermococcus.
OX NCBI_TaxID=69014;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC BAA-918 / JCM 12380 / KOD1;
RX PubMed=10628865; DOI=10.1007/s004380051145;
RA Tang X., Ezaki S., Fujiwara S., Takagi M., Atomi H., Imanaka T.;
RT "The tryptophan biosynthesis gene cluster trpCDEGFBA from Pyrococcus
RT kodakaraensis KOD1 is regulated at the transcriptional level and expressed
RT as a single mRNA.";
RL Mol. Gen. Genet. 262:815-821(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-918 / JCM 12380 / KOD1;
RX PubMed=15710748; DOI=10.1101/gr.3003105;
RA Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.;
RT "Complete genome sequence of the hyperthermophilic archaeon Thermococcus
RT kodakaraensis KOD1 and comparison with Pyrococcus genomes.";
RL Genome Res. 15:352-363(2005).
CC -!- FUNCTION: The beta subunit is responsible for the synthesis of L-
CC tryptophan from indole and L-serine. {ECO:0000255|HAMAP-Rule:MF_00133}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate + L-serine = D-
CC glyceraldehyde 3-phosphate + H2O + L-tryptophan;
CC Xref=Rhea:RHEA:10532, ChEBI:CHEBI:15377, ChEBI:CHEBI:33384,
CC ChEBI:CHEBI:57912, ChEBI:CHEBI:58866, ChEBI:CHEBI:59776; EC=4.2.1.20;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00133};
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00133};
CC -!- PATHWAY: Amino-acid biosynthesis; L-tryptophan biosynthesis; L-
CC tryptophan from chorismate: step 5/5. {ECO:0000255|HAMAP-
CC Rule:MF_00133}.
CC -!- SUBUNIT: Tetramer of two alpha and two beta chains. {ECO:0000255|HAMAP-
CC Rule:MF_00133}.
CC -!- SIMILARITY: Belongs to the TrpB family. {ECO:0000255|HAMAP-
CC Rule:MF_00133}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB030011; BAA82550.1; -; Genomic_DNA.
DR EMBL; AP006878; BAD84446.1; -; Genomic_DNA.
DR PIR; T43927; T43927.
DR AlphaFoldDB; Q9YGB0; -.
DR SMR; Q9YGB0; -.
DR IntAct; Q9YGB0; 1.
DR MINT; Q9YGB0; -.
DR STRING; 69014.TK0257; -.
DR EnsemblBacteria; BAD84446; BAD84446; TK0257.
DR KEGG; tko:TK0257; -.
DR PATRIC; fig|69014.16.peg.256; -.
DR eggNOG; arCOG01433; Archaea.
DR HOGENOM; CLU_016734_3_1_2; -.
DR InParanoid; Q9YGB0; -.
DR OMA; GPEHAMF; -.
DR PhylomeDB; Q9YGB0; -.
DR BioCyc; MetaCyc:MON-3562; -.
DR BRENDA; 4.2.1.122; 5246.
DR BRENDA; 4.2.1.20; 5246.
DR UniPathway; UPA00035; UER00044.
DR Proteomes; UP000000536; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0004834; F:tryptophan synthase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0000162; P:tryptophan biosynthetic process; IBA:GO_Central.
DR CDD; cd06446; Trp-synth_B; 1.
DR Gene3D; 3.40.50.1100; -; 2.
DR HAMAP; MF_00133; Trp_synth_beta; 1.
DR InterPro; IPR001926; PLP-dep.
DR InterPro; IPR006653; Trp_synth_b_CS.
DR InterPro; IPR006654; Trp_synth_beta.
DR InterPro; IPR023026; Trp_synth_beta/beta-like.
DR InterPro; IPR036052; Trypto_synt_PLP_dependent.
DR Pfam; PF00291; PALP; 1.
DR PIRSF; PIRSF001413; Trp_syn_beta; 1.
DR SUPFAM; SSF53686; SSF53686; 1.
DR TIGRFAMs; TIGR00263; trpB; 1.
DR PROSITE; PS00168; TRP_SYNTHASE_BETA; 1.
PE 3: Inferred from homology;
KW Amino-acid biosynthesis; Aromatic amino acid biosynthesis; Lyase;
KW Pyridoxal phosphate; Reference proteome; Tryptophan biosynthesis.
FT CHAIN 1..389
FT /note="Tryptophan synthase beta chain 1"
FT /id="PRO_0000099053"
FT MOD_RES 85
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00133"
SQ SEQUENCE 389 AA; 42603 MW; A7D95AAB114DF0CD CRC64;
MDDMFFGRFG GQFVPETLIE PLKKLERAYK KFKDDPEFNE TLEYYLRNWA GRPTPLYYAE
RLSKKLGGAK IYLKREDLLH GGAHKTNNGI GQALLAKFMG KERLIAETGA GQHGVATAMA
GALLGMKVDV YMGAEDVERQ KMNVFRMGLL GARVIPVESG SRTLKDAINE ALRDWVATFE
YSHYLIGSVV GPYPYPVIVR DFQSVIGREA REQILEAEGT LPDAVVACVG GGSNAMGIFY
PFVNDRVRLI GVEAGGKGLE TGLHAASLNA GELGVFHGML SYFLQNEEGQ ITPTHSVSAG
LDYPGVGPEH AYLKDSGRAE YVTVTDEEAL RAFHELSRTE GILPALESAH AVAYAMKIAP
EMDKDEIIIV NLSGRGDKDL DIVRRVGNV