TRPB_RHIEC
ID TRPB_RHIEC Reviewed; 406 AA.
AC Q2KE82; P56929;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 07-MAR-2006, sequence version 1.
DT 25-MAY-2022, entry version 114.
DE RecName: Full=Tryptophan synthase beta chain {ECO:0000255|HAMAP-Rule:MF_00133};
DE EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00133};
GN Name=trpB {ECO:0000255|HAMAP-Rule:MF_00133}; OrderedLocusNames=RHE_CH00021;
OS Rhizobium etli (strain CFN 42 / ATCC 51251).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
OX NCBI_TaxID=347834;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND FUNCTION IN SYMBIOSIS.
RC STRAIN=CE3;
RX PubMed=10517032; DOI=10.1094/mpmi.1999.12.10.926;
RA Tate R., Riccio A., Caputo E., Cermola M., Favre R., Patriarca E.J.;
RT "The Rhizobium etli trpB gene is essential for an effective symbiotic
RT interaction with Phaseolus vulgaris.";
RL Mol. Plant Microbe Interact. 12:926-933(1999).
RN [2]
RP SEQUENCE REVISION TO 92; 143; 171; 219; 262 AND 337.
RA Patriarca E.J.;
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CFN 42 / ATCC 51251;
RX PubMed=16505379; DOI=10.1073/pnas.0508502103;
RA Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.,
RA Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A.,
RA Jimenez-Jacinto V., Collado-Vides J., Davila G.;
RT "The partitioned Rhizobium etli genome: genetic and metabolic redundancy in
RT seven interacting replicons.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006).
CC -!- FUNCTION: The beta subunit is responsible for the synthesis of L-
CC tryptophan from indole and L-serine. Essential for production of nod
CC factors and establishment of symbiosis. {ECO:0000255|HAMAP-
CC Rule:MF_00133, ECO:0000269|PubMed:10517032}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate + L-serine = D-
CC glyceraldehyde 3-phosphate + H2O + L-tryptophan;
CC Xref=Rhea:RHEA:10532, ChEBI:CHEBI:15377, ChEBI:CHEBI:33384,
CC ChEBI:CHEBI:57912, ChEBI:CHEBI:58866, ChEBI:CHEBI:59776; EC=4.2.1.20;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00133};
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00133};
CC -!- PATHWAY: Amino-acid biosynthesis; L-tryptophan biosynthesis; L-
CC tryptophan from chorismate: step 5/5. {ECO:0000255|HAMAP-
CC Rule:MF_00133}.
CC -!- SUBUNIT: Tetramer of two alpha and two beta chains. {ECO:0000255|HAMAP-
CC Rule:MF_00133}.
CC -!- SIMILARITY: Belongs to the TrpB family. {ECO:0000255|HAMAP-
CC Rule:MF_00133}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AJ245564; CAB55324.2; -; Genomic_DNA.
DR EMBL; CP000133; ABC88854.1; -; Genomic_DNA.
DR RefSeq; WP_011423426.1; NC_007761.1.
DR AlphaFoldDB; Q2KE82; -.
DR SMR; Q2KE82; -.
DR STRING; 347834.RHE_CH00021; -.
DR EnsemblBacteria; ABC88854; ABC88854; RHE_CH00021.
DR GeneID; 61478483; -.
DR KEGG; ret:RHE_CH00021; -.
DR eggNOG; COG0133; Bacteria.
DR HOGENOM; CLU_016734_3_1_5; -.
DR OMA; HGMKSYF; -.
DR UniPathway; UPA00035; UER00044.
DR Proteomes; UP000001936; Chromosome.
DR GO; GO:0004834; F:tryptophan synthase activity; IEA:UniProtKB-UniRule.
DR CDD; cd06446; Trp-synth_B; 1.
DR Gene3D; 3.40.50.1100; -; 2.
DR HAMAP; MF_00133; Trp_synth_beta; 1.
DR InterPro; IPR001926; PLP-dep.
DR InterPro; IPR006653; Trp_synth_b_CS.
DR InterPro; IPR006654; Trp_synth_beta.
DR InterPro; IPR023026; Trp_synth_beta/beta-like.
DR InterPro; IPR036052; Trypto_synt_PLP_dependent.
DR Pfam; PF00291; PALP; 1.
DR PIRSF; PIRSF001413; Trp_syn_beta; 1.
DR SUPFAM; SSF53686; SSF53686; 1.
DR TIGRFAMs; TIGR00263; trpB; 1.
DR PROSITE; PS00168; TRP_SYNTHASE_BETA; 1.
PE 1: Evidence at protein level;
KW Amino-acid biosynthesis; Aromatic amino acid biosynthesis; Lyase;
KW Pyridoxal phosphate; Reference proteome; Tryptophan biosynthesis.
FT CHAIN 1..406
FT /note="Tryptophan synthase beta chain"
FT /id="PRO_1000018380"
FT MOD_RES 99
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00133"
FT CONFLICT 57..58
FT /note="KH -> ND (in Ref. 1; CAB55324)"
FT /evidence="ECO:0000305"
FT CONFLICT 61..62
FT /note="AH -> RD (in Ref. 1; CAB55324)"
FT /evidence="ECO:0000305"
FT CONFLICT 91..92
FT /note="EL -> DV (in Ref. 1; CAB55324)"
FT /evidence="ECO:0000305"
FT CONFLICT 133
FT /note="T -> A (in Ref. 1; CAB55324)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 406 AA; 43538 MW; 218B41FE6DA26D9E CRC64;
MNETPKPNSF RSGPDEDGRF GIYGGRFVAE TLMPLILDLQ DEWNKAKSDP AFQAELKHLG
AHYIGRPSPL YFAERLTAEL GGAKIYFKRE ELNHTGSHKI NNCIGQILLA KRMGKTRIIA
ETGAGQHGVA SATVAARFGL PCVVYMGATD VERQAPNVFR MKLLGAEVKP VTAGSGTLKD
AMNEALRDWV TNVEDTYYLI GTAAGPHPYP EMVRDFQSVI GAEAKEQMLA AEGRLPDLVV
AAVGGGSNAI GIFHPFLDDS SVKIVGVEAG GKGLQGDEHC ASITAGSPGV LHGNRTYLLQ
DGDGQIKEGH SISAGLDYPG IGPEHSWLSD IGRVDYVPIM DHEALEAFQT LTRLEGIIPA
LEAAHAIAEV IKRAPKMGKD EIILMNLSGR GDKDIFTVGK ILGMGL