C1GTB_DANRE
ID C1GTB_DANRE Reviewed; 374 AA.
AC Q7SYI5;
DT 01-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B;
DE EC=2.4.1.122 {ECO:0000250|UniProtKB:Q9NS00};
DE AltName: Full=Core 1 O-glycan T-synthase B;
DE AltName: Full=Core 1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase 1-B;
DE AltName: Full=Core 1 beta1,3-galactosyltransferase 1-B;
DE Short=C1GalT1-B;
DE Short=Core 1 beta3-Gal-T1-B;
GN Name=c1galt1b; Synonyms=c1galt1; ORFNames=zgc:66485;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=AB;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Glycosyltransferase that generates the core 1 O-glycan Gal-
CC beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many
CC extended O-glycans in glycoproteins. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=an N-acetyl-alpha-D-galactosaminyl derivative + UDP-alpha-D-
CC galactose = a beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-
CC galactosaminyl derivative + H(+) + UDP; Xref=Rhea:RHEA:15621,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:28257, ChEBI:CHEBI:58223,
CC ChEBI:CHEBI:66914, ChEBI:CHEBI:133470; EC=2.4.1.122;
CC Evidence={ECO:0000250|UniProtKB:Q9NS00};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC -!- PATHWAY: Protein modification; protein glycosylation.
CC -!- SUBUNIT: Homodimer; disulfide-linked. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Single-pass type II
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 31 family. Beta3-Gal-T
CC subfamily. {ECO:0000305}.
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DR EMBL; BC054714; AAH54714.1; -; mRNA.
DR RefSeq; NP_956345.1; NM_200051.1.
DR AlphaFoldDB; Q7SYI5; -.
DR SMR; Q7SYI5; -.
DR STRING; 7955.ENSDARP00000111673; -.
DR CAZy; GT31; Glycosyltransferase Family 31.
DR PaxDb; Q7SYI5; -.
DR GeneID; 337131; -.
DR KEGG; dre:337131; -.
DR CTD; 337131; -.
DR ZFIN; ZDB-GENE-030131-9075; c1galt1lb.
DR eggNOG; KOG2246; Eukaryota.
DR InParanoid; Q7SYI5; -.
DR OrthoDB; 1407357at2759; -.
DR PhylomeDB; Q7SYI5; -.
DR UniPathway; UPA00378; -.
DR PRO; PR:Q7SYI5; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0016021; C:integral component of membrane; ISS:UniProtKB.
DR GO; GO:0016263; F:glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity; ISS:UniProtKB.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0001525; P:angiogenesis; ISS:UniProtKB.
DR GO; GO:0001822; P:kidney development; ISS:UniProtKB.
DR GO; GO:0016267; P:O-glycan processing, core 1; IBA:GO_Central.
DR InterPro; IPR026842; C1GALT1.
DR InterPro; IPR003378; Fringe-like.
DR PANTHER; PTHR23033:SF9; PTHR23033:SF9; 1.
DR Pfam; PF02434; Fringe; 1.
PE 2: Evidence at transcript level;
KW Disulfide bond; Glycosyltransferase; Magnesium; Membrane; Metal-binding;
KW Reference proteome; Signal-anchor; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..374
FT /note="Glycoprotein-N-acetylgalactosamine 3-beta-
FT galactosyltransferase 1-B"
FT /id="PRO_0000285068"
FT TOPO_DOM 1..8
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 9..25
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 26..374
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT REGION 355..374
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 374 AA; 43454 MW; 06D90B2092CE7618 CRC64;
MKALGARSAF YVGFLVGTCS LYLLLRQAGF TRDSGSREPG THDKTLLEML EEENKNWKKE
RSALFNLNHP HHTGEDGALA DSLYKRVRIL CWVMTGPDNL EKKARHVKAT WSRHCNIVVF
ISSVDNPDFP TVGLNTKEGR DQLYWKTIRA FHYVMEKHSD EADWFLKADD DTYVIVDNLR
WILARHSPED PVYFGRRFKP YVKQGYMSGG AGYVLSKEAL RRFVEGFRTK VCTHTTSVED
LAMGQCMEKI GVKAGDSRDT MQRETFHPFV PESHLTGTFP KTFWYWNYCY YPIVQGPQCC
SDLAVSFHYV DASHMYLLEY YTYHLRAFGY KYRYQPPEPN VKAPEKVETR VLEQKDKVEA
QEEENQSPEL NDKL