TRUB_CAMJJ
ID TRUB_CAMJJ Reviewed; 272 AA.
AC A1W089;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 25-MAY-2022, entry version 83.
DE RecName: Full=tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080};
DE EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};
DE AltName: Full=tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080};
DE Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};
DE AltName: Full=tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080};
DE AltName: Full=tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080};
GN Name=truB {ECO:0000255|HAMAP-Rule:MF_01080};
GN OrderedLocusNames=CJJ81176_1120;
OS Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176).
OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC Campylobacteraceae; Campylobacter.
OX NCBI_TaxID=354242;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=81-176;
RA Fouts D.E., Nelson K.E., Sebastian Y.;
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Responsible for synthesis of pseudouridine from uracil-55 in
CC the psi GC loop of transfer RNAs. {ECO:0000255|HAMAP-Rule:MF_01080}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=uridine(55) in tRNA = pseudouridine(55) in tRNA;
CC Xref=Rhea:RHEA:42532, Rhea:RHEA-COMP:10101, Rhea:RHEA-COMP:10102,
CC ChEBI:CHEBI:65314, ChEBI:CHEBI:65315; EC=5.4.99.25;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01080};
CC -!- SIMILARITY: Belongs to the pseudouridine synthase TruB family. Type 1
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_01080}.
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DR EMBL; CP000538; EAQ72197.1; -; Genomic_DNA.
DR RefSeq; WP_002856304.1; NC_008787.1.
DR AlphaFoldDB; A1W089; -.
DR SMR; A1W089; -.
DR STRING; 354242.CJJ81176_1120; -.
DR EnsemblBacteria; EAQ72197; EAQ72197; CJJ81176_1120.
DR KEGG; cjj:CJJ81176_1120; -.
DR eggNOG; COG0130; Bacteria.
DR HOGENOM; CLU_032087_2_0_7; -.
DR OMA; ELQFIRW; -.
DR Proteomes; UP000000646; Chromosome.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0106029; F:tRNA pseudouridine synthase activity; IEA:UniProtKB-EC.
DR GO; GO:0031119; P:tRNA pseudouridine synthesis; IEA:UniProtKB-UniRule.
DR HAMAP; MF_01080; TruB_bact; 1.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR InterPro; IPR002501; PsdUridine_synth_N.
DR InterPro; IPR014780; tRNA_psdUridine_synth_TruB.
DR PANTHER; PTHR13767; PTHR13767; 1.
DR Pfam; PF01509; TruB_N; 1.
DR SUPFAM; SSF55120; SSF55120; 1.
DR TIGRFAMs; TIGR00431; TruB; 1.
PE 3: Inferred from homology;
KW Isomerase; tRNA processing.
FT CHAIN 1..272
FT /note="tRNA pseudouridine synthase B"
FT /id="PRO_1000084566"
FT ACT_SITE 38
FT /note="Nucleophile"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01080"
SQ SEQUENCE 272 AA; 31381 MW; B4B87FAB0E229FD0 CRC64;
MNKIFAAFKP RGLSSNAFLS TLKKKYKNKK AGYSGTLDPF AKGVLIVAFG QYTKLFRFLK
KTPKTYKATL WLGVYSLSLD DQNIKEIKNI KEFDLANLQQ IIDQMQGIIS YTPPQFSAKR
INGTRAYELA KKGIEANLKP CQMEVFDCKI LSYNHPFLNI EITVSEGAYI RSYCELFARK
LGINATLSSL ERIKEGKFVY NNEKSLNVLK YIDLKPNFIK ELNKLENGAK IFVEELEFHD
EGDYYIETEK YFSIINIKEN TVKYLLNKVE KC