TRXO_ORYSJ
ID TRXO_ORYSJ Reviewed; 174 AA.
AC Q655X0; A0A0N7KMK0; B9FQD9; C7J4A5;
DT 15-JUN-2010, integrated into UniProtKB/Swiss-Prot.
DT 15-JUN-2010, sequence version 2.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Thioredoxin O, mitochondrial;
DE Short=OsTrxo1;
DE AltName: Full=OsTrx22;
DE Flags: Precursor;
GN OrderedLocusNames=Os06g0665900, LOC_Os06g45510;
GN ORFNames=OsJ_22283, P0473H04.30, P0637D03.1;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19825616; DOI=10.1093/mp/ssn076;
RA Chibani K., Wingsle G., Jacquot J.P., Gelhaye E., Rouhier N.;
RT "Comparative genomic study of the thioredoxin family in photosynthetic
RT organisms with emphasis on Populus trichocarpa.";
RL Mol. Plant 2:308-322(2009).
CC -!- FUNCTION: Probable thiol-disulfide oxidoreductase that may participate
CC in various redox reactions.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the thioredoxin family. Plant O-type subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD45394.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAD45397.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAH93672.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=EEE66181.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP003628; BAD45394.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP003633; BAD45397.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008212; BAH93672.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014962; BAS99033.1; -; Genomic_DNA.
DR EMBL; CM000143; EEE66181.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; XP_015641364.1; XM_015785878.1.
DR RefSeq; XP_015641365.1; XM_015785879.1.
DR AlphaFoldDB; Q655X0; -.
DR SMR; Q655X0; -.
DR STRING; 4530.OS06T0665900-00; -.
DR PaxDb; Q655X0; -.
DR PRIDE; Q655X0; -.
DR EnsemblPlants; Os06t0665900-00; Os06t0665900-00; Os06g0665900.
DR GeneID; 9266617; -.
DR Gramene; Os06t0665900-00; Os06t0665900-00; Os06g0665900.
DR KEGG; osa:9266617; -.
DR eggNOG; KOG0907; Eukaryota.
DR HOGENOM; CLU_090389_6_0_1; -.
DR InParanoid; Q655X0; -.
DR OMA; GNWSIVR; -.
DR OrthoDB; 1482186at2759; -.
DR Proteomes; UP000000763; Chromosome 6.
DR Proteomes; UP000007752; Chromosome 6.
DR Proteomes; UP000059680; Chromosome 6.
DR Genevisible; Q655X0; OS.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR InterPro; IPR013766; Thioredoxin_domain.
DR Pfam; PF00085; Thioredoxin; 1.
DR SUPFAM; SSF52833; SSF52833; 1.
DR PROSITE; PS51352; THIOREDOXIN_2; 1.
PE 2: Evidence at transcript level;
KW Disulfide bond; Electron transport; Mitochondrion; Redox-active center;
KW Reference proteome; Transit peptide; Transport.
FT TRANSIT 1..59
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 60..174
FT /note="Thioredoxin O, mitochondrial"
FT /id="PRO_0000394834"
FT DOMAIN 60..172
FT /note="Thioredoxin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT ACT_SITE 96
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 99
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT SITE 97
FT /note="Contributes to redox potential value"
FT /evidence="ECO:0000250"
FT SITE 98
FT /note="Contributes to redox potential value"
FT /evidence="ECO:0000250"
FT DISULFID 96..99
FT /note="Redox-active"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
SQ SEQUENCE 174 AA; 18689 MW; 48B329D0B832D3D4 CRC64;
MALAHRLCRL PRLLPLAAAA AASKPYLPGK PSPAPPPPLS SPPPFPSLSR LFSTTPSSSG
DSSMVVVGSA ESFTSIMSKV EAEKLPAVFY YTAVWCGPCR AMAPVISKLS SRYPKIPIYK
VDIDMDGVGS KLSDLKIFSV PTFHFYYQGR KTGEVVGANA TKLESTMESL HKQL
