C3H14_ARATH
ID C3H14_ARATH Reviewed; 310 AA.
AC Q9C9N3;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 104.
DE RecName: Full=Zinc finger CCCH domain-containing protein 14;
DE Short=AtC3H14;
GN OrderedLocusNames=At1g66810; ORFNames=F4N21.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NOMENCLATURE.
RX PubMed=18221561; DOI=10.1186/1471-2164-9-44;
RA Wang D., Guo Y., Wu C., Yang G., Li Y., Zheng C.;
RT "Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.";
RL BMC Genomics 9:44-44(2008).
CC -!- INTERACTION:
CC Q9C9N3; Q93Z00: TCP14; NbExp=3; IntAct=EBI-15193039, EBI-4424563;
CC Q9C9N3; Q8LPR5: TCP4; NbExp=3; IntAct=EBI-15193039, EBI-15192325;
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DR EMBL; AC013288; AAG60083.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE34558.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59370.1; -; Genomic_DNA.
DR RefSeq; NP_001321733.1; NM_001334249.1.
DR RefSeq; NP_176853.1; NM_105352.3.
DR AlphaFoldDB; Q9C9N3; -.
DR SMR; Q9C9N3; -.
DR BioGRID; 28220; 22.
DR IntAct; Q9C9N3; 22.
DR STRING; 3702.AT1G66810.1; -.
DR PaxDb; Q9C9N3; -.
DR PRIDE; Q9C9N3; -.
DR EnsemblPlants; AT1G66810.1; AT1G66810.1; AT1G66810.
DR EnsemblPlants; AT1G66810.3; AT1G66810.3; AT1G66810.
DR GeneID; 842999; -.
DR Gramene; AT1G66810.1; AT1G66810.1; AT1G66810.
DR Gramene; AT1G66810.3; AT1G66810.3; AT1G66810.
DR KEGG; ath:AT1G66810; -.
DR Araport; AT1G66810; -.
DR TAIR; locus:2033384; AT1G66810.
DR eggNOG; KOG1677; Eukaryota.
DR HOGENOM; CLU_050602_0_0_1; -.
DR InParanoid; Q9C9N3; -.
DR OMA; GTCPYGH; -.
DR OrthoDB; 1089242at2759; -.
DR PhylomeDB; Q9C9N3; -.
DR PRO; PR:Q9C9N3; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C9N3; baseline and differential.
DR Genevisible; Q9C9N3; AT.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IPI:TAIR.
DR GO; GO:1901347; P:negative regulation of secondary cell wall biogenesis; IMP:TAIR.
DR GO; GO:0051511; P:negative regulation of unidimensional cell growth; IMP:TAIR.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:TAIR.
DR InterPro; IPR045877; ZFP36-like.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR12547; PTHR12547; 1.
DR Pfam; PF00642; zf-CCCH; 1.
DR SMART; SM00356; ZnF_C3H1; 2.
DR SUPFAM; SSF90229; SSF90229; 2.
DR PROSITE; PS50103; ZF_C3H1; 2.
PE 2: Evidence at transcript level;
KW Coiled coil; DNA-binding; Metal-binding; Reference proteome; Repeat; Zinc;
KW Zinc-finger.
FT CHAIN 1..310
FT /note="Zinc finger CCCH domain-containing protein 14"
FT /id="PRO_0000371973"
FT ZN_FING 232..260
FT /note="C3H1-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT ZN_FING 270..298
FT /note="C3H1-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT REGION 56..75
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 155..174
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 84..129
FT /evidence="ECO:0000255"
SQ SEQUENCE 310 AA; 35109 MW; 28C141849AE93049 CRC64;
MEKLAASTVT DLACVTAINS SPPPLSPISE QSFNNKHQEE FAASFASLYN SIFSPESLSP
SPPSSSSPPS RVDTTTEHRL LQAKLILEYD ELNEHYELCL NRLQSLMTEL DSLRHENDSL
RFENSDLLKL IRISTSSSSS VSPPAPIHNR QFRHQISDSR SAKRNNQERN SLPKSISVRS
QGYLKINHGF EASDLQTSQL SSNSVSSSQK VCVVQTKGER EALELEVYRQ GMMKTELCNK
WQETGACCYG DNCQFAHGID ELRPVIRHPR YKTEVCRMMV TGAMCPYGHR CHFRHSLTDQ
ERMMMMMLTR
