ID   C3H2_ORYSJ              Reviewed;         386 AA.
AC   Q9FU27;
DT   02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2001, sequence version 1.
DT   03-AUG-2022, entry version 104.
DE   RecName: Full=Zinc finger CCCH domain-containing protein 2;
DE            Short=OsC3H2;
DE   AltName: Full=Protein DELAY OF THE ONSET OF SENESCENCE;
DE            Short=OsDOS;
GN   OrderedLocusNames=Os01g0192000, LOC_Os01g09620; ORFNames=P0671B11.13;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12447438; DOI=10.1038/nature01184;
RA   Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA   Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA   Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA   Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA   Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA   Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA   Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA   Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA   Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA   Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA   Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA   Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA   Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT   "The genome sequence and structure of rice chromosome 1.";
RL   Nature 420:312-316(2002).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [6]
RP   FUNCTION, DEVELOPMENTAL STAGE, AND SUBCELLULAR LOCATION.
RX   PubMed=16778011; DOI=10.1104/pp.106.082941;
RA   Kong Z., Li M., Yang W., Xu W., Xue Y.;
RT   "A novel nuclear-localized CCCH-type zinc finger protein, OsDOS, is
RT   involved in delaying leaf senescence in rice.";
RL   Plant Physiol. 141:1376-1388(2006).
RN   [7]
RP   NOMENCLATURE.
RX   PubMed=18221561; DOI=10.1186/1471-2164-9-44;
RA   Wang D., Guo Y., Wu C., Yang G., Li Y., Zheng C.;
RT   "Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.";
RL   BMC Genomics 9:44-44(2008).
CC   -!- FUNCTION: Involved in leaf senescence delay. May repress jasmonic acid
CC       (JA) signaling role in promoting leaf senescence. May regulate panicle
CC       development and pollination/fertilization process.
CC       {ECO:0000269|PubMed:16778011}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16778011}.
CC   -!- DEVELOPMENTAL STAGE: Expressed in leaf and panicles, but is down-
CC       regulated during natural leaf senescence, panicle development and
CC       pollination. {ECO:0000269|PubMed:16778011}.
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DR   EMBL; AP002746; BAB12694.1; -; Genomic_DNA.
DR   EMBL; AP008207; BAF04190.1; -; Genomic_DNA.
DR   EMBL; AP014957; BAS70829.1; -; Genomic_DNA.
DR   EMBL; AK100770; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015621800.1; XM_015766314.1.
DR   AlphaFoldDB; Q9FU27; -.
DR   STRING; 4530.OS01T0192000-01; -.
DR   PaxDb; Q9FU27; -.
DR   PRIDE; Q9FU27; -.
DR   EnsemblPlants; Os01t0192000-01; Os01t0192000-01; Os01g0192000.
DR   Gramene; Os01t0192000-01; Os01t0192000-01; Os01g0192000.
DR   KEGG; osa:4327304; -.
DR   eggNOG; KOG1595; Eukaryota.
DR   HOGENOM; CLU_044407_0_0_1; -.
DR   InParanoid; Q9FU27; -.
DR   OMA; NCARGRS; -.
DR   OrthoDB; 1188286at2759; -.
DR   Proteomes; UP000000763; Chromosome 1.
DR   Proteomes; UP000059680; Chromosome 1.
DR   ExpressionAtlas; Q9FU27; baseline and differential.
DR   Genevisible; Q9FU27; OS.
DR   GO; GO:0005634; C:nucleus; IDA:Gramene.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0008270; F:zinc ion binding; IC:Gramene.
DR   GO; GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:Gramene.
DR   GO; GO:0010150; P:leaf senescence; IMP:Gramene.
DR   InterPro; IPR045234; Unkempt-like.
DR   InterPro; IPR000571; Znf_CCCH.
DR   PANTHER; PTHR14493; PTHR14493; 1.
DR   Pfam; PF00642; zf-CCCH; 1.
DR   SMART; SM00356; ZnF_C3H1; 2.
DR   PROSITE; PS50103; ZF_C3H1; 2.
PE   2: Evidence at transcript level;
KW   DNA-binding; Jasmonic acid signaling pathway; Metal-binding; Nucleus;
KW   Reference proteome; Repeat; Zinc; Zinc-finger.
FT   CHAIN           1..386
FT                   /note="Zinc finger CCCH domain-containing protein 2"
FT                   /id="PRO_0000346801"
FT   ZN_FING         116..143
FT                   /note="C3H1-type 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT   ZN_FING         151..175
FT                   /note="C3H1-type 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT   REGION          180..200
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          220..252
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        180..196
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   386 AA;  41423 MW;  0244BD287AA5A4C2 CRC64;
     MMMMGEGVSS VPPWSHLPVS GVDVLGGGGG GGDEMTPYVI AALRDYLPAN DVGVGADEEE
     EAAAMAAAVD AYACDEFRMY EFKVRRCARG RSHDWTECPF AHPGEKARRR DPRKYHYSGT
     ACPDFRKGGC KRGDACEYAH GVFECWLHPA RYRTQPCKDG TACRRRVCFF AHTPDQLRVL
     PAQQSSPRSV ASSPLAESYD GSPLRRQAFE SYLTKTIMSS SPTSTLMSPP KSPPSESPPL
     SPDGAAAIRR GSWPGVGSPV NDVLASFRQL RLNKVKSSPS GGWSYPSSSA VYGSPKAATG
     LYSLPTTPLA STATVTTASS FMPNLEPLDL GLIGDEEPVQ RVESGRALRE KVFERLSRDG
     AISGDATAFA TAGVGLDVDW VSDLIN