ID   C3H33_ORYSJ             Reviewed;         601 AA.
AC   Q688R3; Q0DL22;
DT   02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT   11-OCT-2004, sequence version 1.
DT   03-AUG-2022, entry version 89.
DE   RecName: Full=Zinc finger CCCH domain-containing protein 33;
DE            Short=OsC3H33;
GN   OrderedLocusNames=Os05g0128200, LOC_Os05g03760; ORFNames=OSJNBa0056I11.7;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA   Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA   Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA   Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT   "A fine physical map of the rice chromosome 5.";
RL   Mol. Genet. Genomics 274:337-345(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [6]
RP   NOMENCLATURE.
RX   PubMed=18221561; DOI=10.1186/1471-2164-9-44;
RA   Wang D., Guo Y., Wu C., Yang G., Li Y., Zheng C.;
RT   "Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.";
RL   BMC Genomics 9:44-44(2008).
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q688R3-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q688R3-2; Sequence=VSP_035020, VSP_035021;
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DR   EMBL; AC130598; AAU10743.1; -; Genomic_DNA.
DR   EMBL; AP008211; BAF16451.1; -; Genomic_DNA.
DR   EMBL; AP014961; BAS92088.1; -; Genomic_DNA.
DR   EMBL; AP014961; BAS92089.1; -; Genomic_DNA.
DR   EMBL; AK099898; -; NOT_ANNOTATED_CDS; mRNA.
DR   EMBL; AK105767; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015639743.1; XM_015784257.1. [Q688R3-1]
DR   AlphaFoldDB; Q688R3; -.
DR   SMR; Q688R3; -.
DR   STRING; 4530.OS05T0128200-01; -.
DR   PaxDb; Q688R3; -.
DR   PRIDE; Q688R3; -.
DR   EnsemblPlants; Os05t0128200-01; Os05t0128200-01; Os05g0128200. [Q688R3-1]
DR   EnsemblPlants; Os05t0128200-02; Os05t0128200-02; Os05g0128200. [Q688R3-2]
DR   GeneID; 4337692; -.
DR   Gramene; Os05t0128200-01; Os05t0128200-01; Os05g0128200. [Q688R3-1]
DR   Gramene; Os05t0128200-02; Os05t0128200-02; Os05g0128200. [Q688R3-2]
DR   KEGG; osa:4337692; -.
DR   eggNOG; KOG1595; Eukaryota.
DR   HOGENOM; CLU_015068_2_0_1; -.
DR   InParanoid; Q688R3; -.
DR   OMA; SMEGESH; -.
DR   Proteomes; UP000000763; Chromosome 5.
DR   Proteomes; UP000059680; Chromosome 5.
DR   ExpressionAtlas; Q688R3; baseline and differential.
DR   Genevisible; Q688R3; OS.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0060255; P:regulation of macromolecule metabolic process; IEA:UniProt.
DR   GO; GO:0051171; P:regulation of nitrogen compound metabolic process; IEA:UniProt.
DR   GO; GO:0080090; P:regulation of primary metabolic process; IEA:UniProt.
DR   Gene3D; 1.25.40.20; -; 1.
DR   InterPro; IPR002110; Ankyrin_rpt.
DR   InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR   InterPro; IPR045234; Unkempt-like.
DR   InterPro; IPR000571; Znf_CCCH.
DR   PANTHER; PTHR14493; PTHR14493; 1.
DR   Pfam; PF00642; zf-CCCH; 1.
DR   SMART; SM00356; ZnF_C3H1; 2.
DR   SUPFAM; SSF48403; SSF48403; 1.
DR   PROSITE; PS50297; ANK_REP_REGION; 1.
DR   PROSITE; PS50088; ANK_REPEAT; 1.
DR   PROSITE; PS50103; ZF_C3H1; 2.
PE   2: Evidence at transcript level;
KW   Alternative splicing; ANK repeat; DNA-binding; Metal-binding;
KW   Reference proteome; Repeat; Zinc; Zinc-finger.
FT   CHAIN           1..601
FT                   /note="Zinc finger CCCH domain-containing protein 33"
FT                   /id="PRO_0000346828"
FT   REPEAT          71..101
FT                   /note="ANK 1"
FT   REPEAT          106..138
FT                   /note="ANK 2"
FT   ZN_FING         252..280
FT                   /note="C3H1-type 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT   ZN_FING         288..312
FT                   /note="C3H1-type 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT   REGION          167..203
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        177..192
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   VAR_SEQ         325..380
FT                   /note="GMQPTVSSPRSSPPNGLDMAAAAAAMMSPAWPSSPASRLKTALGARELDFDL
FT                   EMLA -> VRVPRPIRHAGGDARRGGGAGRVMGELSCQGRPRRRRHIRAVAGAGADGGM
FT                   IIRGS (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:12869764"
FT                   /id="VSP_035020"
FT   VAR_SEQ         381..601
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:12869764"
FT                   /id="VSP_035021"
SQ   SEQUENCE   601 AA;  63236 MW;  E534463CDF922478 CRC64;
     MCSGPRKPST PPLPQQQKEA TVMAASLLLE LAAADDVAAV RRVVEEEKVS LGVAGLWYGP
     SASGVARLGM ERRTAAMVAA LYGSTGVLGY VVAAAPAEAA RASETDGATP LHMAAAGGAA
     NAVAATRLLL AAGASVDALS ASGLRAGDLL PRATAAEKAI RLLLKSPAVS PSSSPKKSAS
     PPSPPPPQEA KKEYPPDLTL PDLKSGLFST DEFRMYSFKV KPCSRAYSHD WTECPFVHPG
     ENARRRDPRR YSYSCVPCPE FRKGGSCRKG DACEYAHGVF ECWLHPAQYR TRLCKDEVGC
     ARRICFFAHK PDELRAVNPS AVSVGMQPTV SSPRSSPPNG LDMAAAAAAM MSPAWPSSPA
     SRLKTALGAR ELDFDLEMLA LDQYQQKLFD KVSGAPSPRA SWGAAANGLA TASPARAVPD
     YTDLLGSVDP AMLSQLHALS LKQAGDMPAY SSMADTTQMH MPTSPMVGGA NTAFGLDHSM
     AKAIMSSRAS AFAKRSQSFI DRGGRAPAAR SLMSPATTGA PSILSDWGSP DGKLDWGVQG
     DELHKLRKSA SFAFRGQSAM PVATHAAAAE PDVSWVNSLV KDGHAAGDIF AQWPEQEQMV
     A