ID   C3H56_ORYSJ             Reviewed;         367 AA.
AC   Q84UQ3; A0A0P0XC61;
DT   02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2003, sequence version 1.
DT   25-MAY-2022, entry version 98.
DE   RecName: Full=Zinc finger CCCH domain-containing protein 56;
DE            Short=OsC3H56;
GN   OrderedLocusNames=Os08g0159800, LOC_Os08g06330;
GN   ORFNames=P0498E12.129, P0672D01.112;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NOMENCLATURE.
RX   PubMed=18221561; DOI=10.1186/1471-2164-9-44;
RA   Wang D., Guo Y., Wu C., Yang G., Li Y., Zheng C.;
RT   "Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.";
RL   BMC Genomics 9:44-44(2008).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AP004635; BAC66728.1; -; Genomic_DNA.
DR   EMBL; AP004698; BAC99662.1; -; Genomic_DNA.
DR   EMBL; AP008214; BAF22958.1; -; Genomic_DNA.
DR   EMBL; AP014964; BAT03925.1; -; Genomic_DNA.
DR   RefSeq; XP_015648128.1; XM_015792642.1.
DR   RefSeq; XP_015648129.1; XM_015792643.1.
DR   AlphaFoldDB; Q84UQ3; -.
DR   STRING; 4530.OS08T0159800-00; -.
DR   PaxDb; Q84UQ3; -.
DR   PRIDE; Q84UQ3; -.
DR   EnsemblPlants; Os08t0159800-00; Os08t0159800-00; Os08g0159800.
DR   GeneID; 4344715; -.
DR   Gramene; Os08t0159800-00; Os08t0159800-00; Os08g0159800.
DR   KEGG; osa:4344715; -.
DR   eggNOG; KOG1677; Eukaryota.
DR   HOGENOM; CLU_060653_1_0_1; -.
DR   InParanoid; Q84UQ3; -.
DR   OMA; EMWATEE; -.
DR   OrthoDB; 883647at2759; -.
DR   Proteomes; UP000000763; Chromosome 8.
DR   Proteomes; UP000059680; Chromosome 8.
DR   Genevisible; Q84UQ3; OS.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003729; F:mRNA binding; IEA:InterPro.
DR   InterPro; IPR045877; ZFP36-like.
DR   InterPro; IPR041367; Znf-CCCH_4.
DR   InterPro; IPR000571; Znf_CCCH.
DR   InterPro; IPR036855; Znf_CCCH_sf.
DR   PANTHER; PTHR12547; PTHR12547; 1.
DR   Pfam; PF00642; zf-CCCH; 2.
DR   Pfam; PF18044; zf-CCCH_4; 1.
DR   SMART; SM00356; ZnF_C3H1; 3.
DR   SUPFAM; SSF90229; SSF90229; 3.
DR   PROSITE; PS50103; ZF_C3H1; 3.
PE   4: Predicted;
KW   DNA-binding; Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger.
FT   CHAIN           1..367
FT                   /note="Zinc finger CCCH domain-containing protein 56"
FT                   /id="PRO_0000346849"
FT   ZN_FING         87..114
FT                   /note="C3H1-type 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT   ZN_FING         169..197
FT                   /note="C3H1-type 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT   ZN_FING         245..273
FT                   /note="C3H1-type 3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT   REGION          38..80
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   367 AA;  37958 MW;  E08588C319690D98 CRC64;
     MDYTNAIHII PDAAGPDAWA NAAAQGGDAG IWATEDDYNS QWNADGGGGG SSRAGSEQPP
     PGKKSRGGGG GEGGGNTSKS RAIGKMFFKT KLCCKFRAGT CPYVTNCNFA HGMEELRKPP
     PNWQEIVAAH EEATEAREEH QIPIMTSSGP TAGGDAGCGG GGGGGSGRAY KGRHCKKFYT
     DEGCPYGDAC TFLHDEQSKA RESVAISLSP SVGGGGGGGS YNSAAAAAAS ASAAAGNGPM
     QKPSNWKTRI CNKWEMTGYC PFGSKCHFAH GAAELHKYGG GLVDIDSRDA AATPDSKQAV
     VSAKAPAETA AASTTVLPHA DVYHLGVQAQ RSTIAGQRSG QVQRPIQKWK GPDKISRIYG
     DWIDETE