C3H58_ORYSJ
ID C3H58_ORYSJ Reviewed; 252 AA.
AC Q69KP0; A0A0P0XJU1;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2004, sequence version 1.
DT 03-AUG-2022, entry version 66.
DE RecName: Full=Putative zinc finger CCCH domain-containing protein 58;
DE Short=OsC3H58;
GN OrderedLocusNames=Os09g0305900, LOC_Os09g13530; ORFNames=OSJNBa0064I23.11;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [3]
RP NOMENCLATURE.
RX PubMed=18221561; DOI=10.1186/1471-2164-9-44;
RA Wang D., Guo Y., Wu C., Yang G., Li Y., Zheng C.;
RT "Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.";
RL BMC Genomics 9:44-44(2008).
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DR EMBL; AP005912; BAD36500.1; -; Genomic_DNA.
DR EMBL; AP014965; BAT07350.1; -; Genomic_DNA.
DR RefSeq; XP_015611102.1; XM_015755616.1.
DR AlphaFoldDB; Q69KP0; -.
DR PaxDb; Q69KP0; -.
DR PRIDE; Q69KP0; -.
DR EnsemblPlants; Os09t0305900-00; Os09t0305900-00; Os09g0305900.
DR GeneID; 107275553; -.
DR Gramene; Os09t0305900-00; Os09t0305900-00; Os09g0305900.
DR KEGG; osa:107275553; -.
DR HOGENOM; CLU_1104261_0_0_1; -.
DR OMA; AHTTPHC; -.
DR OrthoDB; 647090at2759; -.
DR Proteomes; UP000000763; Chromosome 9.
DR Proteomes; UP000059680; Chromosome 9.
DR Genevisible; Q69KP0; OS.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR Pfam; PF00642; zf-CCCH; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF90229; SSF90229; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW DNA-binding; Metal-binding; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..252
FT /note="Putative zinc finger CCCH domain-containing protein
FT 58"
FT /id="PRO_0000346851"
FT ZN_FING 35..62
FT /note="C3H1-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT REGION 71..95
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 109..180
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 215..252
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 216..241
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 252 AA; 26161 MW; 08ECC21D7BC2B4E9 CRC64;
MDSAAAERPS SYAVNFPPLL PAPAPAVAGA MGVANHKSVL CMKWREGRCH NGVACRYAHG
EEDQRIVPEM RVGGGGTSMH ARSSPPRDGA SSGSTASIAM AACRIEEQRH GRGGESFILP
RSRRKRQALG SGSARSTAPT PPRAHTTPPC SRSVAAPRAS TSPLRPSPVP PPATLHSAAD
VQRSVARALE DFEQRESSSS VFPLAIDIVA EDAMTATSEP SATSDDDAIT TTTSSSTTDA
DELDAAVAAP PK
