ID   C3H59_ORYSJ             Reviewed;         613 AA.
AC   Q69NK8; A0A0P0XMC4;
DT   02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT   25-OCT-2004, sequence version 1.
DT   25-MAY-2022, entry version 105.
DE   RecName: Full=Zinc finger CCCH domain-containing protein 59;
DE            Short=OsC3H59;
GN   OrderedLocusNames=Os09g0364000, LOC_Os09g19940; ORFNames=OJ1001_G09.14;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [5]
RP   NOMENCLATURE.
RX   PubMed=18221561; DOI=10.1186/1471-2164-9-44;
RA   Wang D., Guo Y., Wu C., Yang G., Li Y., Zheng C.;
RT   "Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.";
RL   BMC Genomics 9:44-44(2008).
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DR   EMBL; AP005675; BAD33719.1; -; Genomic_DNA.
DR   EMBL; AP008215; BAF24911.1; -; Genomic_DNA.
DR   EMBL; AP014965; BAT07721.1; -; Genomic_DNA.
DR   EMBL; AK111875; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015651291.1; XM_015795805.1.
DR   AlphaFoldDB; Q69NK8; -.
DR   SMR; Q69NK8; -.
DR   STRING; 4530.OS09T0364000-01; -.
DR   PaxDb; Q69NK8; -.
DR   PRIDE; Q69NK8; -.
DR   EnsemblPlants; Os09t0364000-01; Os09t0364000-01; Os09g0364000.
DR   GeneID; 4346865; -.
DR   Gramene; Os09t0364000-01; Os09t0364000-01; Os09g0364000.
DR   KEGG; osa:4346865; -.
DR   eggNOG; KOG2476; Eukaryota.
DR   HOGENOM; CLU_019955_2_0_1; -.
DR   InParanoid; Q69NK8; -.
DR   OMA; VCPNLYF; -.
DR   OrthoDB; 414028at2759; -.
DR   Proteomes; UP000000763; Chromosome 9.
DR   Proteomes; UP000059680; Chromosome 9.
DR   Genevisible; Q69NK8; OS.
DR   GO; GO:0071014; C:post-mRNA release spliceosomal complex; IBA:GO_Central.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0061632; F:RNA lariat debranching enzyme activator activity; IBA:GO_Central.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR   Gene3D; 3.30.428.10; -; 1.
DR   InterPro; IPR040194; Cwf19-like.
DR   InterPro; IPR006768; Cwf19-like_C_dom-1.
DR   InterPro; IPR006767; Cwf19-like_C_dom-2.
DR   InterPro; IPR036265; HIT-like_sf.
DR   InterPro; IPR000571; Znf_CCCH.
DR   InterPro; IPR036855; Znf_CCCH_sf.
DR   PANTHER; PTHR12072; PTHR12072; 1.
DR   Pfam; PF04677; CwfJ_C_1; 1.
DR   Pfam; PF04676; CwfJ_C_2; 1.
DR   SMART; SM00356; ZnF_C3H1; 2.
DR   SUPFAM; SSF54197; SSF54197; 1.
DR   SUPFAM; SSF90229; SSF90229; 2.
DR   PROSITE; PS50103; ZF_C3H1; 2.
PE   2: Evidence at transcript level;
KW   DNA-binding; Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger.
FT   CHAIN           1..613
FT                   /note="Zinc finger CCCH domain-containing protein 59"
FT                   /id="PRO_0000346852"
FT   ZN_FING         318..346
FT                   /note="C3H1-type 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT   ZN_FING         350..378
FT                   /note="C3H1-type 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT   REGION          275..296
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        65
FT                   /note="G -> S (in Ref. 4; AK111875)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   613 AA;  66909 MW;  ACD06960492D72B1 CRC64;
     MAAAAASPSP ATPPRILLAG DANGRLHQLF KRVTSVNQST GPFHALLCVG QFFSPDAGDG
     DGGGGGEVAD YLEGRAAVPI PTYFTGDYGP AAPRLLAKAA SSARGFSPGG IQICPNLFWL
     RGSARFTLHG LSVVYLSGRK GPGGPGCYSQ DDVDALRALA EEPGIVDLFL TNEWPAGVVN
     GVDTSNAPSQ ISDPHGYDPV VAELVAEIKP RYHIAGSKGV FYAREPYVSD SAAHVTRFIG
     LANVGNKEKQ KFIHAISPTP ASTMSSVDIH ARPPNTTLSP YISPAKSVPV EETPKRPAED
     ADLQYWRYDV KKQRHGEAGG NRLCFKFTSS GSCPRGSKCN YRHDEEAREH YNRNVCFDFL
     NKGKCEKGPE CRFAHSLSDE GAVRDTKPRS ERRRVESSCW FCLSSPDVES HLVISIGEGY
     YCALAKGPLV PNHVLVIPVE HCSSTLKMPV EAEAELGRYK DALAKYFEKQ GKIAIYFEWV
     SQQSRHANLQ AVPVPLSKAS SVKKIFHLAA QRLGFEFSVV NPDGDANRAR ELLRSECDSK
     SSLFYVELPE GSVLLHLVDS NEKFPAQFGR EVLAGLLSMA DRADWRNCKV SKEEEIQMVD
     DFKQGFREFD PAE